Gm55381 Gene Detail

Summary

• Symbol
  Gm55381
• Name
  predicted gene, 55381

• Feature Type
  rRNA gene
• IDs
  MGI:6847233
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:10376287-10376395 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  99 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847233	rRNA gene	ChrX:10376287-10376395 (+)
129S1/SvImJ	ENSMUSG00200034184	rRNA gene	ChrX:5135639-5135747 (+)
A/J	ENSMUSG00195042211	rRNA gene	ChrX:5096484-5096592 (+)
AKR/J	ENSMUSG00220036094	rRNA gene	ChrX:4636526-4636634 (+)
BALB/cJ	ENSMUSG00180031733	rRNA gene	ChrX:5094189-5094297 (+)
C3H/HeJ	ENSMUSG00175034813	rRNA gene	ChrX:5122646-5122754 (+)
C57BL/6NJ	ENSMUSG00215040879	rRNA gene	ChrX:5766946-5767054 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035537	rRNA gene	ChrX:5090411-5090519 (+)
CBA/J	ENSMUSG00210039858	rRNA gene	ChrX:5165541-5165649 (+)
DBA/2J	ENSMUSG00185037325	rRNA gene	ChrX:11757964-11758072 (+)
FVB/NJ	ENSMUSG00205038171	rRNA gene	ChrX:4841813-4841921 (+)
JF1/MsJ	ENSUMUG00000043647	rRNA gene	ChrX:25616391-25616499 (+)
LP/J	ENSMUSG00230032362	rRNA gene	ChrX:16325422-16325530 (+)
NOD/ShiLtJ	ENSMUSG00190043541	rRNA gene	ChrX:5121590-5121698 (+)
NZO/HlLtJ	ENSMUSG00225033856	rRNA gene	ChrX:21543745-21543853 (+)
PWK/PhJ	ENSLUMG00010035991	rRNA gene	ChrX:5030743-5030851 (+)
SPRET/EiJ	ENSMSPG00010026093	rRNA gene	ChrX:5964822-5964930 (+)
WSB/EiJ	ENSIUOG00005017082	rRNA gene	ChrX:1815424-1815532 (+)

Homology

• Gene Tree
  Gm55381
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076115 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076115	Ensembl Gene Model | MGI Sequence Detail	109	C57BL/6J
transcript	ENSMUST00020182470	Ensembl | MGI Sequence Detail	109	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;