Gm55380 Gene Detail

Summary

• Symbol
  Gm55380
• Name
  predicted gene, 55380

• Feature Type
  miRNA gene
• IDs
  MGI:6847231
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:94059695-94059819 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  79 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847231	miRNA gene	Chr13:94059695-94059819 (-)
129S1/SvImJ	ENSMUSG00200009660	miRNA gene	Chr13:88561284-88561408 (-)
A/J	ENSMUSG00195024444	miRNA gene	Chr13:89062312-89062436 (-)
AKR/J	ENSMUSG00220014140	miRNA gene	Chr13:87517369-87517493 (-)
BALB/cJ	ENSMUSG00180016433	miRNA gene	Chr13:89597688-89597812 (-)
C3H/HeJ	ENSMUSG00175023705	miRNA gene	Chr13:89761546-89761670 (-)
C57BL/6NJ	ENSMUSG00215003110	miRNA gene	Chr13:89659175-89659299 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009852	miRNA gene	Chr13:88847873-88847997 (-)
CBA/J	ENSMUSG00210024670	miRNA gene	Chr13:89083249-89083373 (-)
DBA/2J	ENSMUSG00185019370	miRNA gene	Chr13:92743966-92744090 (-)
FVB/NJ	ENSMUSG00205008838	miRNA gene	Chr13:88547270-88547394 (-)
JF1/MsJ	ENSUMUG00000031093	miRNA gene	Chr13:92418894-92419018 (-)
LP/J	ENSMUSG00230038049	miRNA gene	Chr13:102761966-102762090 (-)
NOD/ShiLtJ	ENSMUSG00190019838	miRNA gene	Chr13:89441583-89441707 (-)
NZO/HlLtJ	ENSMUSG00225034360	miRNA gene	Chr13:95275626-95275750 (-)
PWK/PhJ	ENSLUMG00010012005	miRNA gene	Chr13:88529229-88529353 (-)
SPRET/EiJ	ENSMSPG00010006738	miRNA gene	Chr13:89782675-89782799 (-)
WSB/EiJ	ENSIUOG00005032273	miRNA gene	Chr13:88461440-88461564 (-)

Homology

• Gene Tree
  Gm55380
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075601 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075601	Ensembl Gene Model | MGI Sequence Detail	125	C57BL/6J
transcript	ENSMUST00020183726	Ensembl | MGI Sequence Detail	125	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;