Gm55361 Gene Detail

Summary

• Symbol
  Gm55361
• Name
  predicted gene, 55361

• Feature Type
  rRNA gene
• IDs
  MGI:6847193
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:48228974-48229084 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  174 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847193	rRNA gene	Chr19:48228974-48229084 (-)
129S1/SvImJ	ENSMUSG00200021982	rRNA gene	Chr19:44938775-44938885 (-)
A/J	ENSMUSG00195019119	rRNA gene	Chr19:45070036-45070146 (-)
AKR/J	ENSMUSG00220019566	rRNA gene	Chr19:44869784-44869894 (-)
BALB/cJ	ENSMUSG00180022228	rRNA gene	Chr19:45319719-45319829 (-)
C3H/HeJ	ENSMUSG00175006474	rRNA gene	Chr19:44862675-44862785 (-)
C57BL/6NJ	ENSMUSG00215004936	rRNA gene	Chr19:44928590-44928700 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005016988	rRNA gene	Chr19:44514026-44514136 (-)
CBA/J	ENSMUSG00210019443	rRNA gene	Chr19:44942170-44942280 (-)
DBA/2J	ENSMUSG00185009574	rRNA gene	Chr19:45445959-45446069 (-)
FVB/NJ	ENSMUSG00205036989	rRNA gene	Chr19:44355625-44355735 (-)
JF1/MsJ	ENSUMUG00000047287	rRNA gene	Chr19:45660518-45660628 (-)
LP/J	ENSMUSG00230025931	rRNA gene	Chr19:46215437-46215547 (-)
NOD/ShiLtJ	ENSMUSG00190005813	rRNA gene	Chr19:44803024-44803134 (-)
NZO/HlLtJ	ENSMUSG00225044781	rRNA gene	Chr19:49794532-49794642 (-)
PWK/PhJ	ENSLUMG00010001220	rRNA gene	Chr19:44759763-44759873 (-)
SPRET/EiJ	ENSMSPG00010008259	rRNA gene	Chr19:44501655-44501765 (-)
WSB/EiJ	ENSIUOG00005006917	rRNA gene	Chr19:44309198-44309308 (-)

Homology

• Gene Tree
  Gm55361
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075051 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075051	Ensembl Gene Model | MGI Sequence Detail	111	C57BL/6J
transcript	ENSMUST00020181909	Ensembl | MGI Sequence Detail	111	Not Applicable

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;