Gm55360 Gene Detail

Summary

• Symbol
  Gm55360
• Name
  predicted gene, 55360

• Feature Type
  miRNA gene
• IDs
  MGI:6847191
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr19:47907631-47907712 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  101 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847191	miRNA gene	Chr19:47907631-47907712 (-)
129S1/SvImJ	ENSMUSG00200021624	miRNA gene	Chr19:44621820-44621901 (-)
A/J	ENSMUSG00195018944	miRNA gene	Chr19:44753021-44753102 (-)
AKR/J	ENSMUSG00220019830	miRNA gene	Chr19:44546329-44546410 (-)
BALB/cJ	ENSMUSG00180022157	miRNA gene	Chr19:45002728-45002809 (-)
C3H/HeJ	ENSMUSG00175006490	miRNA gene	Chr19:44539123-44539204 (-)
C57BL/6NJ	ENSMUSG00215004922	miRNA gene	Chr19:44606586-44606667 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005016809	miRNA gene	Chr19:44197008-44197089 (-)
CBA/J	ENSMUSG00210019301	miRNA gene	Chr19:44618630-44618711 (-)
DBA/2J	ENSMUSG00185009376	miRNA gene	Chr19:45128988-45129069 (-)
FVB/NJ	ENSMUSG00205035538	miRNA gene	Chr19:44042283-44042364 (-)
JF1/MsJ	ENSUMUG00000047450	miRNA gene	Chr19:45333211-45333292 (-)
LP/J	ENSMUSG00230026361	miRNA gene	Chr19:45898560-45898641 (-)
NOD/ShiLtJ	ENSMUSG00190005875	miRNA gene	Chr19:44484255-44484336 (-)
NZO/HlLtJ	ENSMUSG00225044900	miRNA gene	Chr19:49475732-49475813 (-)
PWK/PhJ	ENSLUMG00010001248	miRNA gene	Chr19:44431982-44432063 (-)
SPRET/EiJ	ENSMSPG00010008303	miRNA gene	Chr19:44179856-44179937 (-)
WSB/EiJ	ENSIUOG00005006848	miRNA gene	Chr19:43992132-43992213 (-)

Homology

• Gene Tree
  Gm55360
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075899 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075899	Ensembl Gene Model | MGI Sequence Detail	82	C57BL/6J
transcript	ENSMUST00020182666	Ensembl | MGI Sequence Detail	82	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm55360:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr159780	Chr19:47907676-47907699 (-)	24 bp
Tssr159779	Chr19:47907632-47907674 (-)	59 bp