Gm55352 Gene Detail

Summary

• Symbol
  Gm55352
• Name
  predicted gene, 55352

• Feature Type
  rRNA gene
• IDs
  MGI:6847175
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:9894680-9894788 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  111 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847175	rRNA gene	Chr3:9894680-9894788 (-)
129S1/SvImJ	ENSMUSG00200000802	rRNA gene	Chr3:6568197-6568305 (-)
A/J	ENSMUSG00195001194	rRNA gene	Chr3:6907522-6907630 (-)
AKR/J	ENSMUSG00220017108	rRNA gene	Chr3:6914518-6914626 (-)
BALB/cJ	ENSMUSG00180007381	rRNA gene	Chr3:6929597-6929705 (-)
C3H/HeJ	ENSMUSG00175005165	rRNA gene	Chr3:6915892-6916000 (-)
C57BL/6NJ	ENSMUSG00215005374	rRNA gene	Chr3:6925471-6925579 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005000277	rRNA gene	Chr3:6989494-6989602 (-)
CBA/J	ENSMUSG00210000779	rRNA gene	Chr3:6901068-6901176 (-)
DBA/2J	ENSMUSG00185000562	rRNA gene	Chr3:6901182-6901290 (-)
FVB/NJ	ENSMUSG00205006145	rRNA gene	Chr3:6728680-6728788 (-)
JF1/MsJ	ENSUMUG00000010894	rRNA gene	Chr3:6775893-6776001 (-)
LP/J	ENSMUSG00230000199	rRNA gene	Chr3:8820193-8820301 (-)
NOD/ShiLtJ	ENSMUSG00190023701	rRNA gene	Chr3:7003339-7003447 (-)
NZO/HlLtJ	ENSMUSG00225001052	rRNA gene	Chr3:11393079-11393187 (-)
PWK/PhJ	ENSLUMG00010008517	rRNA gene	Chr3:6829947-6830055 (-)
SPRET/EiJ	ENSMSPG00010000147	rRNA gene	Chr3:6723902-6724010 (-)
WSB/EiJ	ENSIUOG00005000759	rRNA gene	Chr3:6904702-6904810 (-)

Homology

• Gene Tree
  Gm55352
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076636 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076636	Ensembl Gene Model | MGI Sequence Detail	109	C57BL/6J
transcript	ENSMUST00020181801	Ensembl | MGI Sequence Detail	109	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;