Gm55348 Gene Detail

Summary

• Symbol
  Gm55348
• Name
  predicted gene, 55348

• Feature Type
  miRNA gene
• IDs
  MGI:6847167
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:22789817-22789926 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  145 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847167	miRNA gene	Chr6:22789817-22789926 (+)
129S1/SvImJ	ENSMUSG00200020022	miRNA gene	Chr6:19848062-19848171 (+)
A/J	ENSMUSG00195013389	miRNA gene	Chr6:19813200-19813309 (+)
AKR/J	ENSMUSG00220001094	miRNA gene	Chr6:19381222-19381331 (+)
BALB/cJ	ENSMUSG00180001367	miRNA gene	Chr6:19944246-19944355 (+)
C3H/HeJ	ENSMUSG00175016691	miRNA gene	Chr6:19754399-19754508 (+)
C57BL/6NJ	ENSMUSG00215012472	miRNA gene	Chr6:19851550-19851659 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005022170	miRNA gene	Chr6:19496470-19496579 (+)
CBA/J	ENSMUSG00210007104	miRNA gene	Chr6:19793180-19793289 (+)
DBA/2J	ENSMUSG00185026455	miRNA gene	Chr6:19895040-19895149 (+)
FVB/NJ	ENSMUSG00205008606	miRNA gene	Chr6:19823656-19823765 (+)
JF1/MsJ	ENSUMUG00000001768	miRNA gene	Chr6:19651813-19651922 (+)
JF1/MsJ	ENSUMUG00000056516	miRNA gene	Chr10:71796382-71796491 (+)
LP/J	ENSMUSG00230030930	miRNA gene	Chr6:20864983-20865092 (+)
NOD/ShiLtJ	ENSMUSG00190010444	miRNA gene	Chr6:19639061-19639170 (+)
NZO/HlLtJ	ENSMUSG00225014769	miRNA gene	Chr6:22797948-22798057 (+)
PWK/PhJ	ENSLUMG00010020226	miRNA gene	Chr6:19372720-19372829 (+)
SPRET/EiJ	ENSMSPG00010014877	miRNA gene	Chr6:19729277-19729386 (+)
WSB/EiJ	ENSIUOG00005003834	miRNA gene	Chr6:19900455-19900564 (+)

Homology

• Gene Tree
  Gm55348
  

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00002076428 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076428	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020183756	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;