Gm55345 Gene Detail

Summary

• Symbol
  Gm55345
• Name
  predicted gene, 55345

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6847161
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:9467235-9467545 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  94 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847161	unclassified non-coding RNA gene	Chr3:9467235-9467545 (+)
129S1/SvImJ	ENSMUSG00200000762	unclassified non-coding RNA gene	Chr3:6139887-6140197 (+)
A/J	ENSMUSG00195001262	unclassified non-coding RNA gene	Chr3:6476069-6476377 (+)
AKR/J	ENSMUSG00220017139	unclassified non-coding RNA gene	Chr3:6485687-6485997 (+)
BALB/cJ	ENSMUSG00180007329	unclassified non-coding RNA gene	Chr3:6498395-6498703 (+)
C3H/HeJ	ENSMUSG00175005070	unclassified non-coding RNA gene	Chr3:6484433-6484741 (+)
C57BL/6NJ	ENSMUSG00215005654	unclassified non-coding RNA gene	Chr3:6496527-6496837 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005000306	unclassified non-coding RNA gene	Chr3:6549753-6550061 (+)
CBA/J	ENSMUSG00210000702	unclassified non-coding RNA gene	Chr3:6469544-6469852 (+)
DBA/2J	ENSMUSG00185000541	unclassified non-coding RNA gene	Chr3:6472152-6472462 (+)
FVB/NJ	ENSMUSG00205006033	unclassified non-coding RNA gene	Chr3:6300172-6300482 (+)
JF1/MsJ	ENSUMUG00000010917	unclassified non-coding RNA gene	Chr3:6351235-6351545 (+)
LP/J	ENSMUSG00230000191	unclassified non-coding RNA gene	Chr3:8391832-8392142 (+)
NOD/ShiLtJ	ENSMUSG00190023262	unclassified non-coding RNA gene	Chr3:6575895-6576205 (+)
NZO/HlLtJ	ENSMUSG00225000850	unclassified non-coding RNA gene	Chr3:10959120-10959430 (+)
PWK/PhJ	ENSLUMG00010008463	unclassified non-coding RNA gene	Chr3:6406266-6406576 (+)
SPRET/EiJ	ENSMSPG00010000170	unclassified non-coding RNA gene	Chr3:6292093-6292403 (+)
WSB/EiJ	ENSIUOG00005000788	unclassified non-coding RNA gene	Chr3:6485073-6485381 (+)

Homology

• Gene Tree
  Gm55345
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076460 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076460	Ensembl Gene Model | MGI Sequence Detail	311	C57BL/6J
transcript	ENSMUST00020181673	Ensembl | MGI Sequence Detail	311	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;