Gm55340 Gene Detail

Summary

• Symbol
  Gm55340
• Name
  predicted gene, 55340

• Feature Type
  miRNA gene
• IDs
  MGI:6847151
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:65546483-65546566 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  117 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847151	miRNA gene	Chr8:65546483-65546566 (-)
129S1/SvImJ	ENSMUSG00200032973	miRNA gene	Chr8:60378963-60379046 (-)
A/J	ENSMUSG00195017298	miRNA gene	Chr8:60734434-60734517 (-)
AKR/J	ENSMUSG00220026246	miRNA gene	Chr8:60566256-60566339 (-)
BALB/cJ	ENSMUSG00180028640	miRNA gene	Chr8:60357554-60357637 (-)
C3H/HeJ	ENSMUSG00175022812	miRNA gene	Chr8:60582448-60582531 (-)
C57BL/6NJ	ENSMUSG00215038622	miRNA gene	Chr8:60370585-60370668 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006737	miRNA gene	Chr8:60181839-60181921 (-)
CBA/J	ENSMUSG00210035156	miRNA gene	Chr8:60463417-60463500 (-)
DBA/2J	ENSMUSG00185022625	miRNA gene	Chr8:66516287-66516370 (-)
FVB/NJ	ENSMUSG00205013428	miRNA gene	Chr8:59815011-59815094 (-)
JF1/MsJ	ENSUMUG00000015916	miRNA gene	Chr8:68774627-68774708 (-)
LP/J	ENSMUSG00230006761	miRNA gene	Chr8:70174910-70174993 (-)
NOD/ShiLtJ	ENSMUSG00190033843	miRNA gene	Chr8:60340751-60340834 (-)
NZO/HlLtJ	ENSMUSG00225048935	miRNA gene	Chr8:73587806-73587889 (-)
PWK/PhJ	ENSLUMG00010013001	miRNA gene	Chr8:60262847-60262929 (-)
SPRET/EiJ	ENSMSPG00010040466	miRNA gene	Chr8:61525682-61525765 (-)
WSB/EiJ	ENSIUOG00005026944	miRNA gene	Chr8:61261955-61262038 (-)

Homology

• Gene Tree
  Gm55340
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076124 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076124	Ensembl Gene Model | MGI Sequence Detail	84	C57BL/6J
transcript	ENSMUST00020182297	Ensembl | MGI Sequence Detail	84	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;