Gm55338 Gene Detail

Summary

• Symbol
  Gm55338
• Name
  predicted gene, 55338

• Feature Type
  miRNA gene
• IDs
  MGI:6847147
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:42773347-42773425 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  126 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847147	miRNA gene	Chr9:42773347-42773425 (-)
129S1/SvImJ	ENSMUSG00200041173	miRNA gene	Chr9:39860389-39860423 (-)
A/J	ENSMUSG00195050537	miRNA gene	Chr9:39606722-39606800 (-)
AKR/J	ENSMUSG00220046659	miRNA gene	Chr9:39695582-39695660 (-)
BALB/cJ	ENSMUSG00180048700	miRNA gene	Chr9:39718476-39718554 (-)
C3H/HeJ	ENSMUSG00175050281	miRNA gene	Chr9:39730295-39730373 (-)
C57BL/6NJ	ENSMUSG00215037960	miRNA gene	Chr9:39692592-39692670 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005044994	miRNA gene	Chr9:39692304-39692338 (-)
CBA/J	ENSMUSG00210047522	miRNA gene	Chr9:39775801-39775879 (-)
DBA/2J	ENSMUSG00185041044	miRNA gene	Chr9:39845102-39845136 (-)
FVB/NJ	ENSMUSG00205045345	miRNA gene	Chr9:40095145-40095223 (-)
JF1/MsJ	ENSUMUG00000049826	miRNA gene	Chr9:39884769-39884803 (-)
LP/J	ENSMUSG00230034034	miRNA gene	Chr9:40151073-40151107 (-)
NOD/ShiLtJ	ENSMUSG00190036934	miRNA gene	Chr9:39924277-39924355 (-)
NZO/HlLtJ	ENSMUSG00225021597	miRNA gene	Chr9:40105690-40105768 (-)
PWK/PhJ	ENSLUMG00010047597	miRNA gene	Chr9:39852694-39852728 (-)
SPRET/EiJ	ENSMSPG00010011537	miRNA gene	Chr9:40617194-40617228 (-)
WSB/EiJ	ENSIUOG00005044467	miRNA gene	Chr9:39339611-39339689 (-)

Homology

• Gene Tree
  Gm55338
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076740 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076740	Ensembl Gene Model | MGI Sequence Detail	79	C57BL/6J
transcript	ENSMUST00020183323	Ensembl | MGI Sequence Detail	79	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;