Gm55335 Gene Detail

Summary

• Symbol
  Gm55335
• Name
  predicted gene, 55335

• Feature Type
  miRNA gene
• IDs
  MGI:6847141
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:122129188-122129270 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  71 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847141	miRNA gene	Chr1:122129188-122129270 (+)
129S1/SvImJ	ENSMUSG00200001824	miRNA gene	Chr1:119599842-119599925 (+)
A/J	ENSMUSG00195004608	miRNA gene	Chr1:118805560-118805643 (+)
AKR/J	ENSMUSG00220025305	miRNA gene	Chr1:118648783-118648866 (+)
BALB/cJ	ENSMUSG00180012951	miRNA gene	Chr1:119284509-119284592 (+)
C3H/HeJ	ENSMUSG00175019733	miRNA gene	Chr1:119083944-119084027 (+)
C57BL/6NJ	ENSMUSG00215013703	miRNA gene	Chr1:119046097-119046179 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006583	miRNA gene	Chr1:117984515-117984619 (+)
CBA/J	ENSMUSG00210001417	miRNA gene	Chr1:118910224-118910307 (+)
DBA/2J	ENSMUSG00185002293	miRNA gene	Chr1:123351715-123351798 (+)
FVB/NJ	ENSMUSG00205012252	miRNA gene	Chr1:118403170-118403253 (+)
JF1/MsJ	ENSUMUG00000002349	miRNA gene	Chr1:122471105-122471233 (+)
LP/J	ENSMUSG00230001557	miRNA gene	Chr1:122782185-122782268 (+)
NOD/ShiLtJ	ENSMUSG00190006766	miRNA gene	Chr1:118899735-118899818 (+)
NZO/HlLtJ	ENSMUSG00225005345	miRNA gene	Chr1:126587741-126587823 (+)
PWK/PhJ	ENSLUMG00010014694	miRNA gene	Chr1:118056387-118056466 (+)
SPRET/EiJ	ENSMSPG00010017158	miRNA gene	Chr1:120738484-120738557 (+)
WSB/EiJ	ENSIUOG00005003082	miRNA gene	Chr1:118757768-118757870 (+)

Homology

• Gene Tree
  Gm55335
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076253 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076253	Ensembl Gene Model | MGI Sequence Detail	83	C57BL/6J
transcript	ENSMUST00020182149	Ensembl | MGI Sequence Detail	83	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;