Gm55325 Gene Detail

Summary

• Symbol
  Gm55325
• Name
  predicted gene, 55325

• Feature Type
  rRNA gene
• IDs
  MGI:6847121
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:64614439-64614560 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  96 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847121	rRNA gene	Chr8:64614439-64614560 (+)
129S1/SvImJ	ENSMUSG00200007514	rRNA gene	Chr8:59446525-59446646 (+)
A/J	ENSMUSG00195012195	rRNA gene	Chr8:59789807-59789927 (+)
AKR/J	ENSMUSG00220006347	rRNA gene	Chr8:59638449-59638569 (+)
BALB/cJ	ENSMUSG00180014607	rRNA gene	Chr8:59430469-59430589 (+)
C3H/HeJ	ENSMUSG00175008223	rRNA gene	Chr8:59655426-59655546 (+)
C57BL/6NJ	ENSMUSG00215011593	rRNA gene	Chr8:59437018-59437139 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006784	rRNA gene	Chr8:59286741-59286861 (+)
CBA/J	ENSMUSG00210009243	rRNA gene	Chr8:59536414-59536534 (+)
DBA/2J	ENSMUSG00185022819	rRNA gene	Chr8:65589872-65589992 (+)
FVB/NJ	ENSMUSG00205011632	rRNA gene	Chr8:58863659-58863780 (+)
JF1/MsJ	ENSUMUG00000014865	rRNA gene	Chr8:67864968-67865088 (+)
LP/J	ENSMUSG00230006793	rRNA gene	Chr8:69247963-69248083 (+)
NOD/ShiLtJ	ENSMUSG00190010112	rRNA gene	Chr8:59395922-59396042 (+)
NZO/HlLtJ	ENSMUSG00225049001	rRNA gene	Chr8:72675945-72676066 (+)
PWK/PhJ	ENSLUMG00010013727	rRNA gene	Chr8:59328384-59328504 (+)
SPRET/EiJ	ENSMSPG00010015402	rRNA gene	Chr8:60571902-60572023 (+)
WSB/EiJ	ENSIUOG00005017794	rRNA gene	Chr8:60352120-60352241 (+)

Homology

• Gene Tree
  Gm55325
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076615 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076615	Ensembl Gene Model | MGI Sequence Detail	122	C57BL/6J
transcript	ENSMUST00020181804	Ensembl | MGI Sequence Detail	122	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;