Gm55319 Gene Detail

Summary

• Symbol
  Gm55319
• Name
  predicted gene, 55319

• Feature Type
  snRNA gene
• IDs
  MGI:6847109
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:36224141-36224247 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  75 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847109	snRNA gene	Chr16:36224141-36224247 (+)
129S1/SvImJ	ENSMUSG00200029641	snRNA gene	Chr16:33159648-33159754 (+)
A/J	ENSMUSG00195011287	snRNA gene	Chr16:32711317-32711423 (+)
AKR/J	ENSMUSG00220028870	snRNA gene	Chr16:33082904-33083010 (+)
BALB/cJ	ENSMUSG00180013217	snRNA gene	Chr16:32926988-32927094 (+)
C3H/HeJ	ENSMUSG00175033250	snRNA gene	Chr16:33147487-33147593 (+)
C57BL/6NJ	ENSMUSG00215024282	snRNA gene	Chr16:32995228-32995334 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032495	snRNA gene	Chr16:33412253-33412359 (+)
CBA/J	ENSMUSG00210029010	snRNA gene	Chr16:33204600-33204706 (+)
DBA/2J	ENSMUSG00185024754	snRNA gene	Chr16:33107595-33107701 (+)
FVB/NJ	ENSMUSG00205025247	snRNA gene	Chr16:33059082-33059188 (+)
JF1/MsJ	ENSUMUG00000040367	snRNA gene	Chr16:33292799-33292905 (+)
LP/J	ENSMUSG00230032981	snRNA gene	Chr16:35679706-35679812 (+)
NOD/ShiLtJ	ENSMUSG00190024586	snRNA gene	Chr16:33219841-33219947 (+)
NZO/HlLtJ	ENSMUSG00225040278	snRNA gene	Chr16:38779069-38779175 (+)
PWK/PhJ	ENSLUMG00010029938	snRNA gene	Chr16:33195175-33195281 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005026819	snRNA gene	Chr16:33270691-33270797 (+)

Homology

• Gene Tree
  Gm55319
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002075800 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075800	Ensembl Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	ENSMUST00020182464	Ensembl | MGI Sequence Detail	107	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;