Gm55317 Gene Detail

Summary

• Symbol
  Gm55317
• Name
  predicted gene, 55317

• Feature Type
  snoRNA gene
• IDs
  MGI:6847105
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:123656294-123656430 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  63 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847105	snoRNA gene	Chr5:123656294-123656430 (+)
129S1/SvImJ	ENSMUSG00200029570	snoRNA gene	Chr5:117377673-117377809 (+)
A/J	ENSMUSG00195012403	snoRNA gene	Chr5:116899118-116899254 (+)
AKR/J	ENSMUSG00220048437	snoRNA gene	Chr5:116412094-116412230 (+)
BALB/cJ	ENSMUSG00180040466	snoRNA gene	Chr5:117014073-117014209 (+)
C3H/HeJ	ENSMUSG00175032903	snoRNA gene	Chr5:119031913-119032049 (+)
C57BL/6NJ	ENSMUSG00215043612	snoRNA gene	Chr5:117064679-117064815 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005040823	snoRNA gene	Chr5:116320233-116320369 (+)
CBA/J	ENSMUSG00210010745	snoRNA gene	Chr5:117782662-117782798 (+)
DBA/2J	ENSMUSG00185054486	snoRNA gene	Chr5:120833915-120834051 (+)
FVB/NJ	ENSMUSG00205048098	snoRNA gene	Chr5:116694512-116694648 (+)
JF1/MsJ	ENSUMUG00000051811	snoRNA gene	Chr5:123698164-123698300 (+)
LP/J	ENSMUSG00230048081	snoRNA gene	Chr5:124899627-124899763 (+)
NOD/ShiLtJ	ENSMUSG00190045528	snoRNA gene	Chr5:116708315-116708451 (+)
NZO/HlLtJ	ENSMUSG00225014316	snoRNA gene	Chr5:132597540-132597676 (+)
PWK/PhJ	ENSLUMG00010042533	snoRNA gene	Chr5:115590263-115590399 (+)
SPRET/EiJ	ENSMSPG00010047313	snoRNA gene	Chr5:118898085-118898221 (+)
WSB/EiJ	ENSIUOG00005020010	snoRNA gene	Chr5:119398045-119398181 (+)

Homology

• Gene Tree
  Gm55317
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076894 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076894	Ensembl Gene Model | MGI Sequence Detail	137	C57BL/6J
transcript	ENSMUST00020183460	Ensembl | MGI Sequence Detail	137	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;