Gm55316 Gene Detail

Summary

• Symbol
  Gm55316
• Name
  predicted gene, 55316

• Feature Type
  snRNA gene
• IDs
  MGI:6847103
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:36179580-36179684 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  63 from dbSNP Build 142
• Strain Annotations
  24

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847103	snRNA gene	Chr16:36179580-36179684 (+)
129S1/SvImJ	ENSMUSG00200030484	snRNA gene	Chr16:33084491-33084595 (+)
129S1/SvImJ	ENSMUSG00200029890	snRNA gene	Chr16:33115075-33115179 (+)
A/J	ENSMUSG00195011046	snRNA gene	Chr16:32666713-32666817 (+)
AKR/J	ENSMUSG00220030855	snRNA gene	Chr16:32963639-32963743 (-)
BALB/cJ	ENSMUSG00180013543	snRNA gene	Chr16:32851804-32851908 (+)
BALB/cJ	ENSMUSG00180013349	snRNA gene	Chr16:32882396-32882500 (+)
C3H/HeJ	ENSMUSG00175032000	snRNA gene	Chr16:33102904-33103008 (+)
C57BL/6NJ	ENSMUSG00215025902	snRNA gene	Chr16:32950653-32950757 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032571	snRNA gene	Chr16:33367646-33367750 (+)
CBA/J	ENSMUSG00210029123	snRNA gene	Chr16:33160015-33160119 (+)
DBA/2J	ENSMUSG00185024612	snRNA gene	Chr16:33063017-33063121 (+)
FVB/NJ	ENSMUSG00205028905	snRNA gene	Chr16:32983904-32984008 (+)
FVB/NJ	ENSMUSG00205027741	snRNA gene	Chr16:33014484-33014588 (+)
JF1/MsJ	ENSUMUG00000037940	snRNA gene	Chr16:33249008-33249112 (+)
LP/J	ENSMUSG00230034252	snRNA gene	Chr16:35635125-35635229 (+)
LP/J	ENSMUSG00230034271	snRNA gene	Chr16:35604551-35604655 (+)
NOD/ShiLtJ	ENSMUSG00190024961	snRNA gene	Chr16:33175256-33175360 (+)
NOD/ShiLtJ	ENSMUSG00190025016	snRNA gene	Chr16:33144680-33144784 (+)
NZO/HlLtJ	ENSMUSG00225040560	snRNA gene	Chr16:38734472-38734576 (+)
NZO/HlLtJ	ENSMUSG00225040619	snRNA gene	Chr16:38703890-38703994 (+)
PWK/PhJ	ENSLUMG00010031287	snRNA gene	Chr16:33151394-33151498 (+)
SPRET/EiJ	ENSMSPG00010018166	snRNA gene	Chr16:33085978-33086082 (+)
WSB/EiJ	ENSIUOG00005027444	snRNA gene	Chr16:33226123-33226227 (+)

Homology

• Gene Tree
  Gm55316
  

Sequences &
Gene Models

• All Sequences
  26

• Ensembl
  ENSMUSG00002075419 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075419	Ensembl Gene Model | MGI Sequence Detail	105	C57BL/6J
transcript	ENSMUST00020183718	Ensembl | MGI Sequence Detail	105	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;