Gm55313 Gene Detail

Summary

• Symbol
  Gm55313
• Name
  predicted gene, 55313

• Feature Type
  snRNA gene
• IDs
  MGI:6847097
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:36038292-36038396 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  67 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847097	snRNA gene	Chr16:36038292-36038396 (-)
129S1/SvImJ	ENSMUSG00200029915	snRNA gene	Chr16:33057709-33057813 (-)
A/J	ENSMUSG00195011496	snRNA gene	Chr16:32609348-32609452 (-)
AKR/J	ENSMUSG00220028669	snRNA gene	Chr16:32897068-32897172 (-)
BALB/cJ	ENSMUSG00180013515	snRNA gene	Chr16:32825021-32825125 (-)
C3H/HeJ	ENSMUSG00175034003	snRNA gene	Chr16:32961589-32961693 (-)
C57BL/6NJ	ENSMUSG00215026380	snRNA gene	Chr16:32809358-32809462 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033328	snRNA gene	Chr16:33226251-33226355 (-)
CBA/J	ENSMUSG00210029084	snRNA gene	Chr16:33018706-33018810 (-)
DBA/2J	ENSMUSG00185024997	snRNA gene	Chr16:32921699-32921803 (-)
FVB/NJ	ENSMUSG00205028440	snRNA gene	Chr16:32957117-32957221 (-)
JF1/MsJ	ENSUMUG00000039730	snRNA gene	Chr16:33135750-33135854 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190024828	snRNA gene	Chr16:33117905-33118009 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010031137	snRNA gene	Chr16:33039750-33039854 (-)
SPRET/EiJ	ENSMSPG00010017465	snRNA gene	Chr16:32983816-32983920 (-)
WSB/EiJ	ENSIUOG00005026900	snRNA gene	Chr16:33078080-33078184 (-)

Homology

• Gene Tree
  Gm55313
  

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00002075226 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075226	Ensembl Gene Model | MGI Sequence Detail	105	C57BL/6J
transcript	ENSMUST00020183521	Ensembl | MGI Sequence Detail	105	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;