Gm55312 Gene Detail

Summary

• Symbol
  Gm55312
• Name
  predicted gene, 55312

• Feature Type
  rRNA gene
• IDs
  MGI:6847095
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:116217428-116217543 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  136 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847095	rRNA gene	Chr11:116217428-116217543 (-)
129S1/SvImJ	ENSMUSG00200052298	rRNA gene	Chr11:113584274-113584389 (-)
A/J	ENSMUSG00195031959	rRNA gene	Chr11:113288301-113288416 (-)
AKR/J	ENSMUSG00220033757	rRNA gene	Chr11:113393199-113393314 (-)
BALB/cJ	ENSMUSG00180052630	rRNA gene	Chr11:113584953-113585068 (-)
C3H/HeJ	ENSMUSG00175045834	rRNA gene	Chr11:113540066-113540181 (-)
C57BL/6NJ	ENSMUSG00215047637	rRNA gene	Chr11:113077594-113077709 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005036479	rRNA gene	Chr11:112943073-112943192 (-)
CBA/J	ENSMUSG00210051014	rRNA gene	Chr11:113260057-113260172 (-)
DBA/2J	ENSMUSG00185027861	rRNA gene	Chr11:113576446-113576561 (-)
FVB/NJ	ENSMUSG00205045514	rRNA gene	Chr11:113382721-113382836 (-)
JF1/MsJ	ENSUMUG00000053763	rRNA gene	Chr11:113844782-113844897 (-)
LP/J	ENSMUSG00230051285	rRNA gene	Chr11:114633387-114633502 (-)
NOD/ShiLtJ	ENSMUSG00190050121	rRNA gene	Chr11:113608084-113608199 (-)
NZO/HlLtJ	ENSMUSG00225053307	rRNA gene	Chr11:116686229-116686344 (-)
PWK/PhJ	ENSLUMG00010025224	rRNA gene	Chr11:113361161-113361276 (-)
SPRET/EiJ	ENSMSPG00010045036	rRNA gene	Chr11:113881694-113881809 (-)
WSB/EiJ	ENSIUOG00005049093	rRNA gene	Chr11:113349005-113349120 (-)

Homology

• Gene Tree
  Gm55312
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075039 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075039	Ensembl Gene Model | MGI Sequence Detail	116	C57BL/6J
transcript	ENSMUST00020183195	Ensembl | MGI Sequence Detail	116	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;