Gm55301 Gene Detail

Summary

• Symbol
  Gm55301
• Name
  predicted gene, 55301

• Feature Type
  miRNA gene
• IDs
  MGI:6847073
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:55285790-55285890 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  93 from dbSNP Build 142
• Strain Annotations
  23

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847073	miRNA gene	Chr6:55285790-55285890 (-)
129S1/SvImJ	ENSMUSG00200006419	miRNA gene	Chr6:52261230-52261330 (-)
A/J	ENSMUSG00195035042	miRNA gene	Chr6:51998407-51998507 (-)
AKR/J	ENSMUSG00220006428	miRNA gene	Chr6:51694840-51694940 (-)
BALB/cJ	ENSMUSG00180010765	miRNA gene	Chr6:52292330-52292430 (-)
C3H/HeJ	ENSMUSG00175042599	miRNA gene	Chr6:52056568-52056668 (-)
C57BL/6NJ	ENSMUSG00215026090	miRNA gene	Chr6:52270890-52270990 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009038	miRNA gene	Chr10:49521439-49521539 (-)
CAST/EiJ	ENSTCUG00005014921	miRNA gene	Chr10:20785693-20785793 (+)
CAST/EiJ	ENSTCUG00005025740	miRNA gene	Chr18:30230699-30230799 (+)
CAST/EiJ	ENSTCUG00005029149	miRNA gene	Chr6:23661669-23661769 (-)
CAST/EiJ	ENSTCUG00005008233	miRNA gene	ChrX:104754117-104754217 (+)
CAST/EiJ	ENSTCUG00005040196	miRNA gene	Chr6:51523609-51523709 (-)
CAST/EiJ	ENSTCUG00005011733	miRNA gene	Chr10:108054152-108054252 (+)
CBA/J	ENSMUSG00210034547	miRNA gene	Chr6:52097834-52097934 (-)
DBA/2J	ENSMUSG00185020315	miRNA gene	Chr6:52677390-52677490 (-)
FVB/NJ	ENSMUSG00205029392	miRNA gene	Chr6:52327352-52327452 (-)
JF1/MsJ	ENSUMUG00000038204	miRNA gene	Chr6:52056068-52056168 (-)
LP/J	ENSMUSG00230013763	miRNA gene	Chr6:53758239-53758339 (-)
NOD/ShiLtJ	ENSMUSG00190009116	miRNA gene	Chr6:52008973-52009073 (-)
NZO/HlLtJ	ENSMUSG00225013735	miRNA gene	Chr6:55749865-55749965 (-)
PWK/PhJ	ENSLUMG00010018355	miRNA gene	Chr6:51796816-51796916 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005021031	miRNA gene	Chr6:52354445-52354545 (-)

Homology

• Gene Tree
  Gm55301
  

Sequences &
Gene Models

• All Sequences
  25

• Ensembl
  ENSMUSG00002076023 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076023	Ensembl Gene Model | MGI Sequence Detail	101	C57BL/6J
transcript	ENSMUST00020182087	Ensembl | MGI Sequence Detail	101	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;