Gm55299 Gene Detail

Summary

• Symbol
  Gm55299
• Name
  predicted gene, 55299

• Feature Type
  miRNA gene
• IDs
  MGI:6847069
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:129165978-129166087 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  98 from dbSNP Build 142
• Strain Annotations
  34

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847069	miRNA gene	Chr6:129165978-129166087 (-)
129S1/SvImJ	ENSMUSG00200046500	miRNA gene	Chr6:126269451-126269560 (-)
A/J	ENSMUSG00195038049	miRNA gene	Chr15:40426999-40427107 (+)
A/J	ENSMUSG00195035314	miRNA gene	Chr6:125690463-125690572 (-)
AKR/J	ENSMUSG00220039546	miRNA gene	Chr6:124552086-124552195 (-)
BALB/cJ	ENSMUSG00180040863	miRNA gene	Chr6:126027456-126027565 (-)
BALB/cJ	ENSMUSG00180007505	miRNA gene	Chr3:3410255-3410364 (-)
BALB/cJ	ENSMUSG00180025177	miRNA gene	Chr7:23437856-23437965 (+)
BALB/cJ	ENSMUSG00180025152	miRNA gene	Chr7:23433302-23433411 (+)
BALB/cJ	ENSMUSG00180042162	miRNA gene	Chr6:125978562-125978671 (+)
C3H/HeJ	ENSMUSG00175040718	miRNA gene	Chr6:125707654-125707763 (-)
C57BL/6NJ	ENSMUSG00215031053	miRNA gene	Chr6:125996253-125996362 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005041915	miRNA gene	Chr6:126027934-126028043 (-)
CBA/J	ENSMUSG00210016812	miRNA gene	Chr6:125727484-125727593 (-)
CBA/J	ENSMUSG00210018462	miRNA gene	Chr15:40549562-40549670 (+)
DBA/2J	ENSMUSG00185044747	miRNA gene	Chr6:126428249-126428358 (-)
DBA/2J	ENSMUSG00185047262	miRNA gene	Chr6:126379370-126379479 (+)
DBA/2J	ENSMUSG00185036621	miRNA gene	Chr15:40515122-40515230 (+)
FVB/NJ	ENSMUSG00205041548	miRNA gene	Chr6:125283527-125283636 (-)
JF1/MsJ	ENSUMUG00000044820	miRNA gene	Chr6:125053186-125053295 (-)
LP/J	ENSMUSG00230045591	miRNA gene	Chr6:127624896-127625005 (-)
NOD/ShiLtJ	ENSMUSG00190038445	miRNA gene	Chr6:125423578-125423687 (-)
NZO/HlLtJ	ENSMUSG00225017270	miRNA gene	Chr6:129905111-129905220 (-)
PWK/PhJ	ENSLUMG00010044045	miRNA gene	Chr6:124233228-124233337 (-)
SPRET/EiJ	ENSMSPG00010017985	miRNA gene	Chr1:120520417-120520526 (-)
SPRET/EiJ	ENSMSPG00010035258	miRNA gene	Chr15:6586887-6586996 (+)
SPRET/EiJ	ENSMSPG00010009408	miRNA gene	Chr17:77288326-77288435 (+)
SPRET/EiJ	ENSMSPG00010010247	miRNA gene	Chr13:99477539-99477648 (-)
SPRET/EiJ	ENSMSPG00010043747	miRNA gene	Chr6:126966511-126966620 (-)
SPRET/EiJ	ENSMSPG00010014077	miRNA gene	Chr5:42577836-42577945 (+)
SPRET/EiJ	ENSMSPG00010024035	miRNA gene	Chr6:23212459-23212568 (-)
SPRET/EiJ	ENSMSPG00010051289	miRNA gene	Chr17:23135536-23135645 (-)
SPRET/EiJ	ENSMSPG00010043569	miRNA gene	ChrX:91352398-91352507 (-)
WSB/EiJ	ENSIUOG00005048368	miRNA gene	Chr6:126158158-126158267 (-)

Homology

• Gene Tree
  Gm55299
  

Sequences &
Gene Models

• All Sequences
  36

• Ensembl
  ENSMUSG00002076418 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076418	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020183607	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;