Gm55297 Gene Detail

Summary

• Symbol
  Gm55297
• Name
  predicted gene, 55297

• Feature Type
  miRNA gene
• IDs
  MGI:6847065
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:35260624-35260733 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  111 from dbSNP Build 142
• Strain Annotations
  25

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847065	miRNA gene	Chr16:35260624-35260733 (-)
129S1/SvImJ	ENSMUSG00200029554	miRNA gene	Chr16:32275768-32275877 (-)
A/J	ENSMUSG00195011125	miRNA gene	Chr16:31827021-31827130 (-)
AKR/J	ENSMUSG00220029935	miRNA gene	Chr16:32112896-32113005 (-)
BALB/cJ	ENSMUSG00180013364	miRNA gene	Chr16:32042968-32043077 (-)
C3H/HeJ	ENSMUSG00175033843	miRNA gene	Chr16:32178871-32178980 (-)
C57BL/6NJ	ENSMUSG00215021426	miRNA gene	Chr16:32067911-32068020 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032945	miRNA gene	Chr16:32448012-32448121 (-)
CAST/EiJ	ENSTCUG00005024160	miRNA gene	Chr7:49881554-49881663 (+)
CAST/EiJ	ENSTCUG00005032833	miRNA gene	Chr7:4006809-4006918 (-)
CBA/J	ENSMUSG00210028582	miRNA gene	Chr16:32236018-32236127 (-)
DBA/2J	ENSMUSG00185025568	miRNA gene	Chr16:32139153-32139262 (-)
FVB/NJ	ENSMUSG00205027248	miRNA gene	Chr16:32175183-32175292 (-)
JF1/MsJ	ENSUMUG00000037511	miRNA gene	Chr16:32334684-32334793 (-)
JF1/MsJ	ENSUMUG00000017553	miRNA gene	Chr7:56086648-56086757 (+)
JF1/MsJ	ENSUMUG00000055609	miRNA gene	Chr7:4142392-4142501 (-)
LP/J	ENSMUSG00230032646	miRNA gene	Chr16:34703783-34703892 (-)
NOD/ShiLtJ	ENSMUSG00190023001	miRNA gene	Chr16:32336060-32336169 (-)
NZO/HlLtJ	ENSMUSG00225011981	miRNA gene	Chr7:52445855-52445962 (+)
NZO/HlLtJ	ENSMUSG00225022547	miRNA gene	Chr10:94951967-94952076 (-)
NZO/HlLtJ	ENSMUSG00225040126	miRNA gene	Chr16:37953740-37953849 (-)
PWK/PhJ	ENSLUMG00010005870	miRNA gene	Chr17:77825891-77826000 (-)
PWK/PhJ	ENSLUMG00010002567	miRNA gene	Chr7:46001977-46002086 (+)
PWK/PhJ	ENSLUMG00010030158	miRNA gene	Chr16:32231410-32231519 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005027868	miRNA gene	Chr16:32300606-32300715 (-)

Homology

• Gene Tree
  Gm55297
  

Sequences &
Gene Models

• All Sequences
  27

• Ensembl
  ENSMUSG00002076524 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076524	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020183537	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;