Gm55287 Gene Detail

Summary

• Symbol
  Gm55287
• Name
  predicted gene, 55287

• Feature Type
  miRNA gene
• IDs
  MGI:6847045
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr6:128908756-128908811 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  153 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847045	miRNA gene	Chr6:128908756-128908811 (-)
129S1/SvImJ	ENSMUSG00200047066	miRNA gene	Chr6:125995947-125996002 (-)
A/J	ENSMUSG00195033863	miRNA gene	Chr6:125415643-125415698 (-)
AKR/J	ENSMUSG00220039693	miRNA gene	Chr6:124277287-124277342 (-)
BALB/cJ	ENSMUSG00180037506	miRNA gene	Chr6:125752640-125752695 (-)
C3H/HeJ	ENSMUSG00175039401	miRNA gene	Chr6:125432854-125432909 (-)
C57BL/6NJ	ENSMUSG00215036579	miRNA gene	Chr6:125739019-125739074 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210016659	miRNA gene	Chr6:125452686-125452741 (-)
DBA/2J	ENSMUSG00185045351	miRNA gene	Chr6:126153445-126153500 (-)
FVB/NJ	ENSMUSG00205036999	miRNA gene	Chr6:125021171-125021226 (-)
JF1/MsJ	ENSUMUG00000045884	miRNA gene	Chr6:124735785-124735840 (-)
LP/J	ENSMUSG00230044728	miRNA gene	Chr6:127350097-127350152 (-)
NOD/ShiLtJ	ENSMUSG00190036665	miRNA gene	Chr6:125149028-125149083 (-)
NZO/HlLtJ	ENSMUSG00225016688	miRNA gene	Chr6:129631076-129631131 (-)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010041294	miRNA gene	Chr6:126691764-126691819 (-)
WSB/EiJ	ENSIUOG00005048008	miRNA gene	Chr6:125869040-125869095 (-)

Homology

• Gene Tree
  Gm55287
  

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000119114 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000119114	Ensembl Gene Model | MGI Sequence Detail	56	C57BL/6J
transcript	ENSMUST00000184433	Ensembl | MGI Sequence Detail	56	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm55287:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr63520	Chr6:128910618-128910631 (-)	-1,814 bp