Gm55273 Gene Detail

Summary

• Symbol
  Gm55273
• Name
  predicted gene, 55273

• Feature Type
  miRNA gene
• IDs
  MGI:6847017
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:6403942-6404051 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  45 from dbSNP Build 142
• Strain Annotations
  29

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847017	miRNA gene	Chr3:6403942-6404051 (-)
129S1/SvImJ	ENSMUSG00200000930	miRNA gene	Chr3:3085833-3085942 (-)
129S1/SvImJ	ENSMUSG00200001057	miRNA gene	Chr3:3090400-3090509 (-)
A/J	ENSMUSG00195051913	miRNA gene	Chr7:25880918-25881027 (+)
A/J	ENSMUSG00195051908	miRNA gene	Chr7:25876364-25876473 (+)
A/J	ENSMUSG00195002254	miRNA gene	Chr1:41544146-41544255 (+)
A/J	ENSMUSG00195018394	miRNA gene	Chr1:140905343-140905452 (-)
A/J	ENSMUSG00195001278	miRNA gene	Chr3:3411565-3411674 (-)
A/J	ENSMUSG00195054096	miRNA gene	Chr3:90186917-90187026 (+)
A/J	ENSMUSG00195001253	miRNA gene	Chr3:3406997-3407106 (-)
AKR/J	ENSMUSG00220017259	miRNA gene	Chr3:3393531-3393640 (-)
BALB/cJ	ENSMUSG00180007389	miRNA gene	Chr3:3405687-3405796 (-)
C3H/HeJ	ENSMUSG00175005225	miRNA gene	Chr3:3417638-3417747 (-)
C57BL/6NJ	ENSMUSG00215005813	miRNA gene	Chr3:3405636-3405745 (-)
C57BL/6NJ	ENSMUSG00215005475	miRNA gene	Chr3:3401069-3401178 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005000315	miRNA gene	Chr3:3463402-3463511 (-)
CBA/J	ENSMUSG00210049135	miRNA gene	Chr3:90236789-90236898 (+)
CBA/J	ENSMUSG00210001010	miRNA gene	Chr3:3406893-3407002 (-)
CBA/J	ENSMUSG00210000833	miRNA gene	Chr3:3402325-3402434 (-)
CBA/J	ENSMUSG00210014722	miRNA gene	Chr1:141043179-141043288 (-)
CBA/J	ENSMUSG00210030088	miRNA gene	Chr1:41303357-41303466 (+)
DBA/2J	ENSMUSG00185000582	miRNA gene	Chr3:3396470-3396579 (-)
FVB/NJ	ENSMUSG00205010284	miRNA gene	Chr3:45367466-45367570 (-)
FVB/NJ	ENSMUSG00205006102	miRNA gene	Chr3:3206696-3206805 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230000146	miRNA gene	Chr3:5325884-5325993 (-)
NOD/ShiLtJ	ENSMUSG00190000830	miRNA gene	Chr3:46512587-46512691 (-)
NOD/ShiLtJ	ENSMUSG00190023784	miRNA gene	Chr3:3388646-3388755 (-)
NZO/HlLtJ	ENSMUSG00225001604	miRNA gene	Chr3:7864939-7865048 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005000807	miRNA gene	Chr3:3452235-3452344 (-)

Homology

• Gene Tree
  Gm55273
  

Sequences &
Gene Models

• All Sequences
  31

• Ensembl
  ENSMUSG00002076789 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076789	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020183178	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;