Gm55270 Gene Detail

Summary

• Symbol
  Gm55270
• Name
  predicted gene, 55270

• Feature Type
  miRNA gene
• IDs
  MGI:6847011
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:5946101-5946210 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  57 from dbSNP Build 142
• Strain Annotations
  21

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6847011	miRNA gene	Chr3:5946101-5946210 (+)
129S1/SvImJ	ENSMUSG00200040572	miRNA gene	Chr3:90179089-90179198 (+)
129S1/SvImJ	ENSMUSG00200008933	miRNA gene	Chr1:141574702-141574811 (-)
129S1/SvImJ	ENSMUSG00200001052	miRNA gene	Chr3:2625688-2625797 (+)
129S1/SvImJ	ENSMUSG00200049300	miRNA gene	Chr2:38615759-38615863 (+)
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215026883	miRNA gene	Chr1:141034115-141034224 (-)
C57BL/6NJ	ENSMUSG00215047967	miRNA gene	Chr2:38773113-38773217 (+)
C57BL/6NJ	ENSMUSG00215005329	miRNA gene	Chr3:2939976-2940085 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	ENSMUSG00185000559	miRNA gene	Chr3:2943256-2943365 (+)
DBA/2J	ENSMUSG00185049426	miRNA gene	Chr2:38634071-38634175 (+)
FVB/NJ	ENSMUSG00205006160	miRNA gene	Chr3:2767111-2767220 (+)
FVB/NJ	ENSMUSG00205041461	miRNA gene	Chr2:38430320-38430424 (+)
JF1/MsJ	ENSUMUG00000010522	miRNA gene	Chr3:2922511-2922657 (+)
LP/J	ENSMUSG00230048183	miRNA gene	Chr2:40553656-40553760 (+)
LP/J	ENSMUSG00230000172	miRNA gene	Chr3:4865749-4865858 (+)
NOD/ShiLtJ	ENSMUSG00190023556	miRNA gene	Chr3:2949089-2949198 (+)
NOD/ShiLtJ	ENSMUSG00190044838	miRNA gene	Chr2:38651915-38652019 (+)
NZO/HlLtJ	ENSMUSG00225050586	miRNA gene	Chr2:48264587-48264691 (+)
NZO/HlLtJ	ENSMUSG00225001648	miRNA gene	Chr3:7404759-7404868 (+)
PWK/PhJ	ENSLUMG00010015007	miRNA gene	Chr3:66124229-66124338 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005000823	miRNA gene	Chr3:3016483-3016623 (+)

Homology

• Gene Tree
  Gm55270
  

Sequences &
Gene Models

• All Sequences
  23

• Ensembl
  ENSMUSG00002076241 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076241	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020182647	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;