Gm55257 Gene Detail

Summary

• Symbol
  Gm55257
• Name
  predicted gene, 55257

• Feature Type
  miRNA gene
• IDs
  MGI:6846986
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:91900225-91900304 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  101 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846986	miRNA gene	Chr13:91900225-91900304 (+)
129S1/SvImJ	ENSMUSG00200009594	miRNA gene	Chr13:86393401-86393480 (+)
A/J	ENSMUSG00195024605	miRNA gene	Chr13:86902067-86902155 (+)
AKR/J	ENSMUSG00220014057	miRNA gene	Chr13:85397440-85397519 (+)
BALB/cJ	ENSMUSG00180016568	miRNA gene	Chr13:87435717-87435796 (+)
C3H/HeJ	ENSMUSG00175023615	miRNA gene	Chr13:87610209-87610297 (+)
C57BL/6NJ	ENSMUSG00215003117	miRNA gene	Chr13:87496913-87496992 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009632	miRNA gene	Chr13:86714324-86714412 (+)
CBA/J	ENSMUSG00210024418	miRNA gene	Chr13:86890016-86890104 (+)
DBA/2J	ENSMUSG00185010270	miRNA gene	Chr13:90576011-90576099 (+)
FVB/NJ	ENSMUSG00205008956	miRNA gene	Chr13:86373147-86373235 (+)
JF1/MsJ	ENSUMUG00000025351	miRNA gene	Chr13:90309710-90309798 (+)
LP/J	ENSMUSG00230004763	miRNA gene	Chr13:100594136-100594224 (+)
NOD/ShiLtJ	ENSMUSG00190018629	miRNA gene	Chr13:87282332-87282420 (+)
NZO/HlLtJ	ENSMUSG00225034474	miRNA gene	Chr13:93124462-93124550 (+)
PWK/PhJ	ENSLUMG00010011636	miRNA gene	Chr13:86426759-86426847 (+)
SPRET/EiJ	ENSMSPG00010006714	miRNA gene	Chr13:87616037-87616126 (+)
WSB/EiJ	ENSIUOG00005031252	miRNA gene	Chr13:86301045-86301124 (+)

Homology

• Gene Tree
  Gm55257
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075889 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075889	Ensembl Gene Model | MGI Sequence Detail	80	C57BL/6J
transcript	ENSMUST00020183653	Ensembl | MGI Sequence Detail	80	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm55257:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr120616	Chr13:91898321-91898354 (+)	-1,887 bp