Gm55254 Gene Detail

Summary

• Symbol
  Gm55254
• Name
  predicted gene, 55254

• Feature Type
  miRNA gene
• IDs
  MGI:6846980
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:3620525-3620616 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  91 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846980	miRNA gene	Chr3:3620525-3620616 (+)
129S1/SvImJ	ENSMUSG00200000916	miRNA gene	Chr3:306873-306964 (+)
A/J	ENSMUSG00195001206	miRNA gene	Chr3:638483-638578 (+)
AKR/J	ENSMUSG00220017125	miRNA gene	Chr3:623559-623650 (+)
BALB/cJ	ENSMUSG00180007228	miRNA gene	Chr3:630802-630895 (+)
C3H/HeJ	ENSMUSG00175005046	miRNA gene	Chr3:634139-634232 (+)
C57BL/6NJ	ENSMUSG00215005463	miRNA gene	Chr3:619480-619571 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005000232	miRNA gene	Chr3:706334-706421 (+)
CBA/J	ENSMUSG00210000891	miRNA gene	Chr3:628761-628856 (+)
DBA/2J	ENSMUSG00185000515	miRNA gene	Chr3:622146-622237 (+)
FVB/NJ	ENSMUSG00205006162	miRNA gene	Chr3:473927-474018 (+)
JF1/MsJ	ENSUMUG00000010596	miRNA gene	Chr3:657023-657114 (+)
LP/J	ENSMUSG00230000124	miRNA gene	Chr3:2546995-2547086 (+)
NOD/ShiLtJ	ENSMUSG00190022785	miRNA gene	Chr3:624588-624679 (+)
NZO/HlLtJ	ENSMUSG00225001546	miRNA gene	Chr3:5085990-5086081 (+)
PWK/PhJ	ENSLUMG00010008341	miRNA gene	Chr3:664388-664479 (+)
SPRET/EiJ	ENSMSPG00010000186	miRNA gene	Chr3:518127-518256 (+)
WSB/EiJ	ENSIUOG00005000777	miRNA gene	Chr3:626092-626181 (+)

Homology

• Gene Tree
  Gm55254
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076386 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076386	Ensembl Gene Model | MGI Sequence Detail	92	C57BL/6J
transcript	ENSMUST00020181927	Ensembl | MGI Sequence Detail	92	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;