Gm55250 Gene Detail

Summary

• Symbol
  Gm55250
• Name
  predicted gene, 55250

• Feature Type
  miRNA gene
• IDs
  MGI:6846972
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:3092718-3092817 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  52 from dbSNP Build 142
• Strain Annotations
  20

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846972	miRNA gene	Chr3:3092718-3092817 (-)
129S1/SvImJ	ENSMUSG00200008753	miRNA gene	Chr7:50475731-50475830 (+)
129S1/SvImJ	ENSMUSG00200002663	miRNA gene	Chr1:133575-133666 (-)
A/J	ENSMUSG00195001207	miRNA gene	Chr3:101042-101141 (-)
AKR/J	ENSMUSG00220017124	miRNA gene	Chr3:80592-80691 (-)
BALB/cJ	ENSMUSG00180007230	miRNA gene	Chr3:97483-97582 (-)
C3H/HeJ	ENSMUSG00175005047	miRNA gene	Chr3:89205-89304 (-)
C57BL/6NJ	ENSMUSG00215005466	miRNA gene	Chr3:80781-80880 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005000231	miRNA gene	Chr3:183299-183398 (-)
CBA/J	ENSMUSG00210000898	miRNA gene	Chr3:95472-95571 (-)
DBA/2J	ENSMUSG00185000514	miRNA gene	Chr3:84793-84892 (-)
FVB/NJ	ENSMUSG00205015520	miRNA gene	Chr6:44416-44517 (-)
FVB/NJ	ENSMUSG00205010369	miRNA gene	Chr17:1217-1316 (+)
JF1/MsJ	ENSUMUG00000010601	miRNA gene	Chr3:109484-109583 (-)
LP/J	ENSMUSG00230000175	miRNA gene	Chr3:2013729-2013828 (-)
NOD/ShiLtJ	ENSMUSG00190022834	miRNA gene	Chr3:91271-91370 (-)
NZO/HlLtJ	ENSMUSG00225001675	miRNA gene	Chr3:4552681-4552780 (-)
PWK/PhJ	ENSLUMG00010008343	miRNA gene	Chr3:94712-94811 (-)
SPRET/EiJ	ENSMSPG00010018836	miRNA gene	Chr16:37502-37602 (+)
WSB/EiJ	ENSIUOG00005000775	miRNA gene	Chr3:85687-85786 (-)

Homology

• Gene Tree
  Gm55250
  

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00002075999 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075999	Ensembl Gene Model | MGI Sequence Detail	100	C57BL/6J
transcript	ENSMUST00020181724	Ensembl | MGI Sequence Detail	100	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;