Gm55247 Gene Detail

Summary

• Symbol
  Gm55247
• Name
  predicted gene, 55247

• Feature Type
  miRNA gene
• IDs
  MGI:6846966
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:14252802-14252901 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  88 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846966	miRNA gene	Chr1:14252802-14252901 (+)
129S1/SvImJ	ENSMUSG00200018629	miRNA gene	Chr1:11627523-11627622 (+)
A/J	ENSMUSG00195027577	miRNA gene	Chr1:11407169-11407268 (+)
AKR/J	ENSMUSG00220008387	miRNA gene	Chr1:11481983-11482082 (+)
BALB/cJ	ENSMUSG00180026962	miRNA gene	Chr1:11473515-11473614 (+)
C3H/HeJ	ENSMUSG00175000492	miRNA gene	Chr1:11402186-11402285 (+)
C57BL/6NJ	ENSMUSG00215014542	miRNA gene	Chr1:11454350-11454449 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005023113	miRNA gene	Chr1:11806984-11807083 (+)
CBA/J	ENSMUSG00210002953	miRNA gene	Chr1:11272653-11272752 (+)
DBA/2J	ENSMUSG00185004187	miRNA gene	Chr1:12340540-12340639 (+)
FVB/NJ	ENSMUSG00205018161	miRNA gene	Chr1:11553881-11553980 (+)
JF1/MsJ	ENSUMUG00000024446	miRNA gene	Chr1:11628881-11628980 (+)
LP/J	ENSMUSG00230019232	miRNA gene	Chr1:12328945-12329044 (+)
NOD/ShiLtJ	ENSMUSG00190033900	miRNA gene	Chr1:11380602-11380701 (+)
NZO/HlLtJ	ENSMUSG00225005497	miRNA gene	Chr1:15707325-15707424 (+)
PWK/PhJ	ENSLUMG00010023229	miRNA gene	Chr1:11245821-11245920 (+)
SPRET/EiJ	ENSMSPG00010027485	miRNA gene	Chr1:11943924-11944023 (+)
WSB/EiJ	ENSIUOG00005011983	miRNA gene	Chr1:11401465-11401564 (+)

Homology

• Gene Tree
  Gm55247
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075819 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075819	Ensembl Gene Model | MGI Sequence Detail	100	C57BL/6J
transcript	ENSMUST00020182033	Ensembl | MGI Sequence Detail	100	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;