Gm55245 Gene Detail

Summary

• Symbol
  Gm55245
• Name
  predicted gene, 55245

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6846962
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr14:35291910-35292077 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  126 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846962	unclassified non-coding RNA gene	Chr14:35291910-35292077 (+)
129S1/SvImJ	ENSMUSG00200038536	unclassified non-coding RNA gene	Chr14:27116120-27116287 (+)
A/J	ENSMUSG00195014542	unclassified non-coding RNA gene	Chr14:28193295-28193462 (+)
AKR/J	ENSMUSG00220036849	unclassified non-coding RNA gene	Chr14:27316564-27316731 (+)
BALB/cJ	ENSMUSG00180029926	unclassified non-coding RNA gene	Chr14:27281756-27281923 (+)
C3H/HeJ	ENSMUSG00175044274	unclassified non-coding RNA gene	Chr14:27353085-27353252 (+)
C57BL/6NJ	ENSMUSG00215036813	unclassified non-coding RNA gene	Chr14:27592890-27593057 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005025813	unclassified non-coding RNA gene	Chr14:27388205-27388372 (+)
CBA/J	ENSMUSG00210044754	unclassified non-coding RNA gene	Chr14:27599651-27599818 (+)
DBA/2J	ENSMUSG00185015499	unclassified non-coding RNA gene	Chr14:31840365-31840532 (+)
FVB/NJ	ENSMUSG00205038471	unclassified non-coding RNA gene	Chr14:27454651-27454818 (+)
JF1/MsJ	ENSUMUG00000052335	unclassified non-coding RNA gene	Chr14:39106755-39106922 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190020046	unclassified non-coding RNA gene	Chr14:27600704-27600871 (+)
NZO/HlLtJ	ENSMUSG00225042044	unclassified non-coding RNA gene	Chr14:33480244-33480411 (+)
PWK/PhJ	ENSLUMG00010023728	unclassified non-coding RNA gene	Chr14:15675018-15675185 (+)
SPRET/EiJ	ENSMSPG00010044448	unclassified non-coding RNA gene	Chr14:29281174-29281341 (+)
WSB/EiJ	ENSIUOG00005012870	unclassified non-coding RNA gene	Chr14:27405962-27406129 (+)

Homology

• Gene Tree
  Gm55245
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002076245 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076245	Ensembl Gene Model | MGI Sequence Detail	168	C57BL/6J
transcript	ENSMUST00020183079	Ensembl | MGI Sequence Detail	168	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm55245:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr4373	Chr14:35290452-35290456 (+)	-1,456 bp