Gm55235 Gene Detail

Summary

• Symbol
  Gm55235
• Name
  predicted gene, 55235

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6846942
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:83687721-83687914 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  108 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846942	unclassified non-coding RNA gene	Chr6:83687721-83687914 (+)
129S1/SvImJ	ENSMUSG00200012435	unclassified non-coding RNA gene	Chr6:80654861-80655054 (+)
A/J	ENSMUSG00195012740	unclassified non-coding RNA gene	Chr6:80328744-80328937 (+)
AKR/J	ENSMUSG00220001982	unclassified non-coding RNA gene	Chr6:79278617-79278810 (+)
BALB/cJ	ENSMUSG00180010257	unclassified non-coding RNA gene	Chr6:80704775-80704968 (+)
C3H/HeJ	ENSMUSG00175038610	unclassified non-coding RNA gene	Chr6:96699868-96700061 (-)
C57BL/6NJ	ENSMUSG00215016999	unclassified non-coding RNA gene	Chr6:80707465-80707658 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005008419	unclassified non-coding RNA gene	Chr6:80713733-80713926 (+)
CBA/J	ENSMUSG00210011342	unclassified non-coding RNA gene	Chr6:80525778-80525971 (+)
DBA/2J	ENSMUSG00185045574	unclassified non-coding RNA gene	Chr6:81072855-81073048 (+)
FVB/NJ	ENSMUSG00205027236	unclassified non-coding RNA gene	Chr6:79746394-79746587 (+)
JF1/MsJ	ENSUMUG00000021482	unclassified non-coding RNA gene	Chr6:80133388-80133581 (+)
LP/J	ENSMUSG00230050702	unclassified non-coding RNA gene	Chr6:82212077-82212270 (+)
NOD/ShiLtJ	ENSMUSG00190001784	unclassified non-coding RNA gene	Chr6:80149504-80149697 (+)
NZO/HlLtJ	ENSMUSG00225020459	unclassified non-coding RNA gene	Chr6:84132057-84132250 (+)
PWK/PhJ	ENSLUMG00010006312	unclassified non-coding RNA gene	Chr6:79480377-79480570 (+)
SPRET/EiJ	ENSMSPG00010046071	unclassified non-coding RNA gene	Chr6:81609353-81609547 (+)
WSB/EiJ	ENSIUOG00005019328	unclassified non-coding RNA gene	Chr6:81090768-81090961 (+)

Homology

• Gene Tree
  Gm55235
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Gm55235
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075910 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075910	Ensembl Gene Model | MGI Sequence Detail	194	C57BL/6J
transcript	ENSMUST00020183243	Ensembl | MGI Sequence Detail	194	Not Applicable

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:235276 Saito M, et al., Identification of Stmm3 locus conferring resistance to late-stage chemically induced skin papillomas on mouse chromosome 4 by congenic mapping and allele-specific alteration analysis. Exp Anim. 2014;63(3):339-48