Gm55234 Gene Detail

Summary

• Symbol
  Gm55234
• Name
  predicted gene, 55234

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6846940
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:83680500-83680965 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  107 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846940	unclassified non-coding RNA gene	Chr6:83680500-83680965 (+)
129S1/SvImJ	ENSMUSG00200012404	unclassified non-coding RNA gene	Chr6:80647638-80648103 (+)
A/J	ENSMUSG00195012722	unclassified non-coding RNA gene	Chr6:80321521-80321986 (+)
AKR/J	ENSMUSG00220001975	unclassified non-coding RNA gene	Chr6:79271394-79271859 (+)
BALB/cJ	ENSMUSG00180010219	unclassified non-coding RNA gene	Chr6:80697551-80698016 (+)
C3H/HeJ	ENSMUSG00175038529	unclassified non-coding RNA gene	Chr6:96706819-96707284 (-)
C57BL/6NJ	ENSMUSG00215016836	unclassified non-coding RNA gene	Chr6:80700243-80700708 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005008414	unclassified non-coding RNA gene	Chr6:80706527-80706987 (+)
CBA/J	ENSMUSG00210011334	unclassified non-coding RNA gene	Chr6:80518556-80519021 (+)
DBA/2J	ENSMUSG00185045523	unclassified non-coding RNA gene	Chr6:81065632-81066097 (+)
FVB/NJ	ENSMUSG00205027063	unclassified non-coding RNA gene	Chr6:79739171-79739636 (+)
JF1/MsJ	ENSUMUG00000021385	unclassified non-coding RNA gene	Chr6:80126387-80126847 (+)
LP/J	ENSMUSG00230050617	unclassified non-coding RNA gene	Chr6:82204854-82205319 (+)
NOD/ShiLtJ	ENSMUSG00190001767	unclassified non-coding RNA gene	Chr6:80142283-80142748 (+)
NZO/HlLtJ	ENSMUSG00225020548	unclassified non-coding RNA gene	Chr6:84125061-84125521 (+)
PWK/PhJ	ENSLUMG00010006300	unclassified non-coding RNA gene	Chr6:79473384-79473849 (+)
SPRET/EiJ	ENSMSPG00010046037	unclassified non-coding RNA gene	Chr6:81602209-81602667 (+)
WSB/EiJ	ENSIUOG00005019300	unclassified non-coding RNA gene	Chr6:81083548-81084013 (+)

Homology

• Gene Tree
  Gm55234
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Gm55234
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076237 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076237	Ensembl Gene Model | MGI Sequence Detail	466	C57BL/6J
transcript	ENSMUST00020182045	Ensembl | MGI Sequence Detail	466	Not Applicable

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:235276 Saito M, et al., Identification of Stmm3 locus conferring resistance to late-stage chemically induced skin papillomas on mouse chromosome 4 by congenic mapping and allele-specific alteration analysis. Exp Anim. 2014;63(3):339-48