Gm55233 Gene Detail

Summary

• Symbol
  Gm55233
• Name
  predicted gene, 55233

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6846938
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:83679473-83679659 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  117 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846938	unclassified non-coding RNA gene	Chr6:83679473-83679659 (+)
129S1/SvImJ	ENSMUSG00200012455	unclassified non-coding RNA gene	Chr6:80646611-80646797 (+)
A/J	ENSMUSG00195012759	unclassified non-coding RNA gene	Chr6:80320494-80320680 (+)
AKR/J	ENSMUSG00220001985	unclassified non-coding RNA gene	Chr6:79270367-79270553 (+)
BALB/cJ	ENSMUSG00180010284	unclassified non-coding RNA gene	Chr6:80696524-80696710 (+)
C3H/HeJ	ENSMUSG00175038679	unclassified non-coding RNA gene	Chr6:96708125-96708311 (-)
C57BL/6NJ	ENSMUSG00215017174	unclassified non-coding RNA gene	Chr6:80699216-80699402 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005008429	unclassified non-coding RNA gene	Chr6:80705510-80705687 (+)
CBA/J	ENSMUSG00210011356	unclassified non-coding RNA gene	Chr6:80517529-80517715 (+)
DBA/2J	ENSMUSG00185045625	unclassified non-coding RNA gene	Chr6:81064605-81064791 (+)
FVB/NJ	ENSMUSG00205027378	unclassified non-coding RNA gene	Chr6:79738144-79738330 (+)
JF1/MsJ	ENSUMUG00000021716	unclassified non-coding RNA gene	Chr6:80125370-80125547 (+)
LP/J	ENSMUSG00230050720	unclassified non-coding RNA gene	Chr6:82203827-82204013 (+)
NOD/ShiLtJ	ENSMUSG00190001796	unclassified non-coding RNA gene	Chr6:80141256-80141442 (+)
NZO/HlLtJ	ENSMUSG00225020717	unclassified non-coding RNA gene	Chr6:84124044-84124221 (+)
PWK/PhJ	ENSLUMG00010006319	unclassified non-coding RNA gene	Chr6:79472367-79472544 (+)
SPRET/EiJ	ENSMSPG00010046115	unclassified non-coding RNA gene	Chr6:81601183-81601373 (+)
WSB/EiJ	ENSIUOG00005019357	unclassified non-coding RNA gene	Chr6:81082521-81082707 (+)

Homology

• Gene Tree
  Gm55233
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Gm55233
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076206 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076206	Ensembl Gene Model | MGI Sequence Detail	187	C57BL/6J
transcript	ENSMUST00020182096	Ensembl | MGI Sequence Detail	187	Not Applicable

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:235276 Saito M, et al., Identification of Stmm3 locus conferring resistance to late-stage chemically induced skin papillomas on mouse chromosome 4 by congenic mapping and allele-specific alteration analysis. Exp Anim. 2014;63(3):339-48