Gm55231 Gene Detail

Summary

• Symbol
  Gm55231
• Name
  predicted gene, 55231

• Feature Type
  miRNA gene
• IDs
  MGI:6846934
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:149477959-149478059 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  89 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846934	miRNA gene	Chr6:149477959-149478059 (+)
129S1/SvImJ	ENSMUSG00200003900	miRNA gene	Chr6:146999000-146999100 (+)
A/J	ENSMUSG00195003844	miRNA gene	Chr6:145905682-145905782 (+)
AKR/J	ENSMUSG00220012766	miRNA gene	Chr6:144177129-144177229 (+)
BALB/cJ	ENSMUSG00180002574	miRNA gene	Chr6:146032685-146032785 (+)
C3H/HeJ	ENSMUSG00175002489	miRNA gene	Chr6:145988293-145988393 (+)
C57BL/6NJ	ENSMUSG00215003735	miRNA gene	Chr6:146135424-146135524 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011254	miRNA gene	Chr6:146773388-146773488 (+)
CBA/J	ENSMUSG00210005241	miRNA gene	Chr6:146046312-146046412 (+)
DBA/2J	ENSMUSG00185015935	miRNA gene	Chr6:146690213-146690313 (+)
FVB/NJ	ENSMUSG00205000071	miRNA gene	Chr6:145033972-145034072 (+)
JF1/MsJ	ENSUMUG00000014701	miRNA gene	Chr6:145331147-145331247 (+)
LP/J	ENSMUSG00230005727	miRNA gene	Chr6:147769329-147769429 (+)
NOD/ShiLtJ	ENSMUSG00190002488	miRNA gene	Chr6:146521510-146521610 (+)
NZO/HlLtJ	ENSMUSG00225013884	miRNA gene	Chr6:150680062-150680162 (+)
PWK/PhJ	ENSLUMG00010002403	miRNA gene	Chr6:144394143-144394243 (+)
SPRET/EiJ	ENSMSPG00010016412	miRNA gene	Chr6:148352459-148352559 (+)
WSB/EiJ	ENSIUOG00005005139	miRNA gene	Chr6:146746540-146746640 (+)

Homology

• Gene Tree
  Gm55231
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075364 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075364	Ensembl Gene Model | MGI Sequence Detail	101	C57BL/6J
transcript	ENSMUST00020183383	Ensembl | MGI Sequence Detail	101	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;