Gm55227 Gene Detail

Summary

• Symbol
  Gm55227
• Name
  predicted gene, 55227

• Feature Type
  miRNA gene
• IDs
  MGI:6846926
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:96000193-96000293 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  102 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846926	miRNA gene	Chr10:96000193-96000293 (+)
129S1/SvImJ	ENSMUSG00200020623	miRNA gene	Chr10:92510824-92510924 (+)
A/J	ENSMUSG00195017180	miRNA gene	Chr10:92942271-92942371 (+)
AKR/J	ENSMUSG00220026550	miRNA gene	Chr10:92503975-92504075 (+)
BALB/cJ	ENSMUSG00180009495	miRNA gene	Chr10:92950348-92950448 (+)
C3H/HeJ	ENSMUSG00175006090	miRNA gene	Chr10:92844045-92844145 (+)
C57BL/6NJ	ENSMUSG00215007389	miRNA gene	Chr10:92531823-92531923 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005005763	miRNA gene	Chr10:92242255-92242355 (+)
CBA/J	ENSMUSG00210022995	miRNA gene	Chr10:92675247-92675347 (+)
DBA/2J	ENSMUSG00185018860	miRNA gene	Chr10:92892438-92892538 (+)
FVB/NJ	ENSMUSG00205004288	miRNA gene	Chr10:92598149-92598249 (+)
JF1/MsJ	ENSUMUG00000032732	miRNA gene	Chr10:94342598-94342698 (+)
LP/J	ENSMUSG00230022213	miRNA gene	Chr10:94804639-94804739 (+)
NOD/ShiLtJ	ENSMUSG00190027950	miRNA gene	Chr10:92924398-92924498 (+)
NZO/HlLtJ	ENSMUSG00225022014	miRNA gene	Chr10:99042973-99043073 (+)
PWK/PhJ	ENSLUMG00010005596	miRNA gene	Chr10:92591258-92591358 (+)
SPRET/EiJ	ENSMSPG00010010756	miRNA gene	Chr10:94240775-94240875 (+)
WSB/EiJ	ENSIUOG00005013119	miRNA gene	Chr10:92629694-92629794 (+)

Homology

• Gene Tree
  Gm55227
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076793 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076793	Ensembl Gene Model | MGI Sequence Detail	101	C57BL/6J
transcript	ENSMUST00020183592	Ensembl | MGI Sequence Detail	101	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm55227:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr95411	Chr10:95999421-95999423 (+)	-771 bp