Gm55224 Gene Detail

Summary

• Symbol
  Gm55224
• Name
  predicted gene, 55224

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6846920
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:83568803-83569125 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846920	unclassified non-coding RNA gene	Chr6:83568803-83569125 (-)
129S1/SvImJ	ENSMUSG00200012497	unclassified non-coding RNA gene	Chr6:80538150-80538472 (-)
A/J	ENSMUSG00195012283	unclassified non-coding RNA gene	Chr6:80212013-80212335 (-)
AKR/J	ENSMUSG00220002164	unclassified non-coding RNA gene	Chr6:79159041-79159363 (-)
BALB/cJ	ENSMUSG00180009916	unclassified non-coding RNA gene	Chr6:80588070-80588392 (-)
C3H/HeJ	ENSMUSG00175041964	unclassified non-coding RNA gene	Chr6:96818679-96819001 (+)
C57BL/6NJ	ENSMUSG00215015641	unclassified non-coding RNA gene	Chr6:80588512-80588834 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005008521	unclassified non-coding RNA gene	Chr6:80598187-80598509 (-)
CBA/J	ENSMUSG00210011389	unclassified non-coding RNA gene	Chr6:80406835-80407157 (-)
DBA/2J	ENSMUSG00185044158	unclassified non-coding RNA gene	Chr6:80953910-80954232 (-)
FVB/NJ	ENSMUSG00205025563	unclassified non-coding RNA gene	Chr6:79629673-79629995 (-)
JF1/MsJ	ENSUMUG00000022645	unclassified non-coding RNA gene	Chr6:80006407-80006729 (-)
LP/J	ENSMUSG00230050766	unclassified non-coding RNA gene	Chr6:82095384-82095706 (-)
NOD/ShiLtJ	ENSMUSG00190002129	unclassified non-coding RNA gene	Chr6:80032805-80033127 (-)
NZO/HlLtJ	ENSMUSG00225021570	unclassified non-coding RNA gene	Chr6:84005143-84005465 (-)
PWK/PhJ	ENSLUMG00010006695	unclassified non-coding RNA gene	Chr6:79358460-79358782 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005018495	unclassified non-coding RNA gene	Chr6:80971933-80972255 (-)

Homology

• Gene Tree
  Gm55224
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Gm55224
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002076019 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076019	Ensembl Gene Model | MGI Sequence Detail	323	C57BL/6J
transcript	ENSMUST00020181815	Ensembl | MGI Sequence Detail	323	Not Applicable

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:235276 Saito M, et al., Identification of Stmm3 locus conferring resistance to late-stage chemically induced skin papillomas on mouse chromosome 4 by congenic mapping and allele-specific alteration analysis. Exp Anim. 2014;63(3):339-48