Gm55214 Pseudogene Detail

Summary

• Symbol
  Gm55214
• Name
  predicted gene, 55214

• Feature Type
  pseudogene
• IDs
  MGI:6846901
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:152420747-152420872 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  97 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846901	pseudogene	Chr2:152420747-152420872 (-)
129S1/SvImJ	ENSMUSG00200030517	pseudogene	Chr2:149320512-149320637 (-)
A/J	ENSMUSG00195022706	pseudogene	Chr2:149607940-149608065 (-)
AKR/J	ENSMUSG00220046826	pseudogene	Chr2:148929436-148929561 (-)
BALB/cJ	ENSMUSG00180044747	pseudogene	Chr2:149090869-149090994 (-)
C3H/HeJ	ENSMUSG00175045761	pseudogene	Chr2:149837106-149837231 (-)
C57BL/6NJ	ENSMUSG00215035503	pseudogene	Chr2:149264088-149264213 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005043413	pseudogene	Chr2:148190200-148190325 (-)
CBA/J	ENSMUSG00210045774	pseudogene	Chr2:149773620-149773745 (-)
DBA/2J	ENSMUSG00185049722	pseudogene	Chr2:149424106-149424231 (-)
FVB/NJ	ENSMUSG00205039649	pseudogene	Chr2:148520883-148521008 (-)
JF1/MsJ	ENSUMUG00000047573	pseudogene	Chr2:149096554-149096679 (-)
LP/J	ENSMUSG00230037092	pseudogene	Chr2:151072908-151073033 (-)
NOD/ShiLtJ	ENSMUSG00190042654	pseudogene	Chr2:149195947-149196072 (-)
NZO/HlLtJ	ENSMUSG00225005844	pseudogene	Chr2:159112254-159112379 (-)
PWK/PhJ	ENSLUMG00010045799	pseudogene	Chr2:149063227-149063352 (-)
SPRET/EiJ	ENSMSPG00010029910	pseudogene	Chr2:151790750-151790875 (-)
WSB/EiJ	ENSIUOG00005048280	pseudogene	Chr2:148928064-148928189 (-)

Homology

• Gene Tree
  Gm55214
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000118649 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118649	Ensembl Gene Model | MGI Sequence Detail	126	C57BL/6J
transcript	ENSMUST00000239414	Ensembl | MGI Sequence Detail	126	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;