Gm55194 Gene Detail

Summary

• Symbol
  Gm55194
• Name
  predicted gene, 55194

• Feature Type
  miRNA gene
• IDs
  MGI:6846861
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  ChrX:142610219-142610340 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  64 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846861	miRNA gene	ChrX:142610219-142610340 (-)
129S1/SvImJ	ENSMUSG00200048612	miRNA gene	ChrX:121626058-121626188 (-)
A/J	ENSMUSG00195021389	miRNA gene	ChrX:125464559-125464689 (-)
AKR/J	ENSMUSG00220039303	miRNA gene	ChrX:118916200-118916321 (-)
BALB/cJ	ENSMUSG00180040471	miRNA gene	ChrX:121894598-121894728 (-)
C3H/HeJ	ENSMUSG00175031061	miRNA gene	ChrX:125781836-125781957 (-)
C57BL/6NJ	ENSMUSG00215045749	miRNA gene	ChrX:122380758-122380879 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005037727	miRNA gene	ChrX:122966832-122966953 (-)
CBA/J	ENSMUSG00210033880	miRNA gene	ChrX:122705676-122705797 (-)
DBA/2J	ENSMUSG00185033759	miRNA gene	ChrX:136596585-136596706 (-)
FVB/NJ	ENSMUSG00205038646	miRNA gene	ChrX:121093917-121094044 (-)
JF1/MsJ	ENSUMUG00000033908	miRNA gene	ChrX:155851932-155852047 (-)
LP/J	ENSMUSG00230033099	miRNA gene	ChrX:143226685-143226815 (-)
NOD/ShiLtJ	ENSMUSG00190042556	miRNA gene	ChrX:122087534-122087658 (-)
NZO/HlLtJ	ENSMUSG00225043100	miRNA gene	ChrX:147917683-147917807 (-)
PWK/PhJ	ENSLUMG00010045392	miRNA gene	ChrX:120563563-120563696 (-)
SPRET/EiJ	ENSMSPG00010041365	miRNA gene	ChrX:125298609-125298742 (-)
WSB/EiJ	ENSIUOG00005039621	miRNA gene	ChrX:122735748-122735869 (-)

Homology

• Gene Tree
  Gm55194
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075758 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075758	Ensembl Gene Model | MGI Sequence Detail	122	C57BL/6J
transcript	ENSMUST00020182199	Ensembl | MGI Sequence Detail	122	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm55194:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr164314	ChrX:142610302-142610363 (-)	7 bp