Gm55189 Gene Detail

Summary

• Symbol
  Gm55189
• Name
  predicted gene, 55189

• Feature Type
  miRNA gene
• IDs
  MGI:6846851
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:10365908-10366073 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  89 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846851	miRNA gene	Chr18:10365908-10366073 (-)
129S1/SvImJ	ENSMUSG00200025696	miRNA gene	Chr18:7314099-7314170 (-)
A/J	ENSMUSG00195009443	miRNA gene	Chr18:7478152-7478317 (-)
AKR/J	ENSMUSG00220020054	miRNA gene	Chr18:7469351-7469516 (-)
BALB/cJ	ENSMUSG00180005628	miRNA gene	Chr18:7925265-7925430 (-)
C3H/HeJ	ENSMUSG00175007866	miRNA gene	Chr18:7460598-7460763 (-)
C57BL/6NJ	ENSMUSG00215020873	miRNA gene	Chr18:7202490-7202655 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005017341	miRNA gene	Chr18:7302852-7303017 (-)
CBA/J	ENSMUSG00210022050	miRNA gene	Chr18:7473531-7473696 (-)
DBA/2J	ENSMUSG00185031142	miRNA gene	Chr18:7480815-7480980 (-)
FVB/NJ	ENSMUSG00205036445	miRNA gene	Chr18:7260008-7260173 (-)
JF1/MsJ	ENSUMUG00000042475	miRNA gene	Chr18:7553851-7553922 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190010301	miRNA gene	Chr18:7253554-7253719 (-)
NZO/HlLtJ	ENSMUSG00225034368	miRNA gene	Chr18:9464262-9464427 (-)
PWK/PhJ	ENSLUMG00010010215	miRNA gene	Chr18:7754167-7754238 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005027703	miRNA gene	Chr18:7334386-7334551 (-)

Homology

• Gene Tree
  Gm55189
  

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00002076537 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076537	Ensembl Gene Model | MGI Sequence Detail	166	C57BL/6J
transcript	ENSMUST00020182259	Ensembl | MGI Sequence Detail	166	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;