Gm55180 Gene Detail

Summary

• Symbol
  Gm55180
• Name
  predicted gene, 55180

• Feature Type
  miRNA gene
• IDs
  MGI:6846833
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:87604897-87605006 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  193 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846833	miRNA gene	Chr13:87604897-87605006 (+)
129S1/SvImJ	ENSMUSG00200009561	miRNA gene	Chr13:82093421-82093530 (+)
A/J	ENSMUSG00195024138	miRNA gene	Chr13:82631214-82631323 (+)
AKR/J	ENSMUSG00220014198	miRNA gene	Chr13:81108476-81108585 (+)
BALB/cJ	ENSMUSG00180016304	miRNA gene	Chr13:83120272-83120381 (+)
C3H/HeJ	ENSMUSG00175024216	miRNA gene	Chr13:83327124-83327233 (+)
C57BL/6NJ	ENSMUSG00215003005	miRNA gene	Chr13:83187503-83187612 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010017	miRNA gene	Chr13:82424285-82424394 (+)
CBA/J	ENSMUSG00210024779	miRNA gene	Chr13:82601896-82602005 (+)
DBA/2J	ENSMUSG00185010203	miRNA gene	Chr13:86293669-86293778 (+)
FVB/NJ	ENSMUSG00205008470	miRNA gene	Chr13:82049836-82049945 (+)
JF1/MsJ	ENSUMUG00000021429	miRNA gene	Chr13:85987234-85987343 (+)
LP/J	ENSMUSG00230004701	miRNA gene	Chr13:96324019-96324128 (+)
NOD/ShiLtJ	ENSMUSG00190019101	miRNA gene	Chr13:82967763-82967872 (+)
NZO/HlLtJ	ENSMUSG00225031018	miRNA gene	Chr13:88841210-88841319 (+)
PWK/PhJ	ENSLUMG00010011573	miRNA gene	Chr13:82076772-82076881 (+)
SPRET/EiJ	ENSMSPG00010006765	miRNA gene	Chr13:83318968-83319077 (+)
WSB/EiJ	ENSIUOG00005031717	miRNA gene	Chr13:81980742-81980851 (+)

Homology

• Gene Tree
  Gm55180
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075184 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075184	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020183701	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;