Gm55179 Gene Detail

Summary

• Symbol
  Gm55179
• Name
  predicted gene, 55179

• Feature Type
  miRNA gene
• IDs
  MGI:6846831
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:86873942-86874051 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  144 from dbSNP Build 142
• Strain Annotations
  29

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846831	miRNA gene	Chr13:86873942-86874051 (-)
129S1/SvImJ	ENSMUSG00200009553	miRNA gene	Chr13:81353784-81353893 (-)
A/J	ENSMUSG00195024116	miRNA gene	Chr13:81875509-81875618 (-)
A/J	ENSMUSG00195008115	miRNA gene	Chr1:107391309-107391417 (+)
AKR/J	ENSMUSG00220016875	miRNA gene	Chr13:80339825-80339934 (-)
BALB/cJ	ENSMUSG00180000614	miRNA gene	Chr1:107676726-107676834 (+)
BALB/cJ	ENSMUSG00180016271	miRNA gene	Chr13:82357459-82357568 (-)
C3H/HeJ	ENSMUSG00175000625	miRNA gene	Chr1:107654344-107654452 (+)
C3H/HeJ	ENSMUSG00175024181	miRNA gene	Chr13:82564244-82564353 (-)
C57BL/6NJ	ENSMUSG00215003008	miRNA gene	Chr13:82456425-82456534 (-)
C57BL/6NJ	ENSMUSG00215008433	miRNA gene	Chr1:107672573-107672681 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010027	miRNA gene	Chr13:81695717-81695826 (-)
CBA/J	ENSMUSG00210024766	miRNA gene	Chr13:81839073-81839182 (-)
DBA/2J	ENSMUSG00185010187	miRNA gene	Chr13:85530832-85530941 (-)
FVB/NJ	ENSMUSG00205008901	miRNA gene	Chr1:106915747-106915855 (+)
FVB/NJ	ENSMUSG00205008448	miRNA gene	Chr13:81275416-81275525 (-)
JF1/MsJ	ENSUMUG00000013362	miRNA gene	Chr1:142102785-142102889 (+)
JF1/MsJ	ENSUMUG00000011747	miRNA gene	Chr12:10742161-10742270 (-)
JF1/MsJ	ENSUMUG00000021302	miRNA gene	Chr13:85227983-85228092 (-)
JF1/MsJ	ENSUMUG00000000280	miRNA gene	Chr1:110631776-110631884 (+)
LP/J	ENSMUSG00230004524	miRNA gene	Chr13:95550468-95550577 (-)
NOD/ShiLtJ	ENSMUSG00190048936	miRNA gene	Chr7:91982163-91982272 (+)
NOD/ShiLtJ	ENSMUSG00190048966	miRNA gene	Chr7:91491580-91491689 (+)
NOD/ShiLtJ	ENSMUSG00190047962	miRNA gene	Chr14:40291615-40291724 (+)
NOD/ShiLtJ	ENSMUSG00190019058	miRNA gene	Chr13:82194194-82194303 (-)
NZO/HlLtJ	ENSMUSG00225030766	miRNA gene	Chr13:88067648-88067757 (-)
PWK/PhJ	ENSLUMG00010011555	miRNA gene	Chr13:81395806-81395915 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005031658	miRNA gene	Chr13:81212783-81212892 (-)
WSB/EiJ	ENSIUOG00005010547	miRNA gene	Chr12:96227577-96227685 (-)

Homology

• Gene Tree
  Gm55179
  

Sequences &
Gene Models

• All Sequences
  31

• Ensembl
  ENSMUSG00002076761 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076761	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020182825	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;