Gm55176 Gene Detail

Summary

• Symbol
  Gm55176
• Name
  predicted gene, 55176

• Feature Type
  rRNA gene
• IDs
  MGI:6846825
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:6197694-6197815 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  94 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846825	rRNA gene	Chr17:6197694-6197815 (+)
129S1/SvImJ	ENSMUSG00200035280	rRNA gene	Chr17:3083287-3083408 (+)
A/J	ENSMUSG00195024230	rRNA gene	Chr17:3088406-3088527 (+)
AKR/J	ENSMUSG00220030023	rRNA gene	Chr17:3291214-3291335 (+)
BALB/cJ	ENSMUSG00180025885	rRNA gene	Chr17:3100196-3100317 (+)
C3H/HeJ	ENSMUSG00175035986	rRNA gene	Chr17:3060152-3060273 (+)
C57BL/6NJ	ENSMUSG00215031478	rRNA gene	Chr17:3080719-3080840 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005022403	rRNA gene	Chr17:3117405-3117526 (+)
CBA/J	ENSMUSG00210038221	rRNA gene	Chr17:3077059-3077180 (+)
DBA/2J	ENSMUSG00185024050	rRNA gene	Chr17:3180315-3180436 (+)
FVB/NJ	ENSMUSG00205009949	rRNA gene	Chr17:3136453-3136574 (+)
JF1/MsJ	ENSUMUG00000037856	rRNA gene	Chr17:3149920-3150041 (+)
LP/J	ENSMUSG00230035000	rRNA gene	Chr17:4277455-4277576 (+)
NOD/ShiLtJ	ENSMUSG00190041338	rRNA gene	Chr17:3072836-3072957 (+)
NZO/HlLtJ	ENSMUSG00225029110	rRNA gene	Chr17:6581435-6581556 (+)
PWK/PhJ	ENSLUMG00010019531	rRNA gene	Chr17:3166870-3166991 (+)
SPRET/EiJ	ENSMSPG00010040079	rRNA gene	Chr17:3094054-3094175 (+)
WSB/EiJ	ENSIUOG00005014767	rRNA gene	Chr17:3120755-3120876 (+)

Homology

• Gene Tree
  Gm55176
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075503 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075503	Ensembl Gene Model | MGI Sequence Detail	122	C57BL/6J
transcript	ENSMUST00020182032	Ensembl | MGI Sequence Detail	122	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;