Gm55174 Gene Detail

Summary

• Symbol
  Gm55174
• Name
  predicted gene, 55174

• Feature Type
  rRNA gene
• IDs
  MGI:6846821
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:70174843-70174960 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  104 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846821	rRNA gene	ChrX:70174843-70174960 (+)
129S1/SvImJ	ENSMUSG00200043694	rRNA gene	ChrX:52314143-52314260 (+)
A/J	ENSMUSG00195037371	rRNA gene	ChrX:55936137-55936254 (+)
AKR/J	ENSMUSG00220046742	rRNA gene	ChrX:51221029-51221146 (+)
BALB/cJ	ENSMUSG00180050555	rRNA gene	ChrX:52523074-52523191 (+)
C3H/HeJ	ENSMUSG00175037134	rRNA gene	ChrX:56091967-56092084 (+)
C57BL/6NJ	ENSMUSG00215041782	rRNA gene	ChrX:52568589-52568706 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005043325	rRNA gene	ChrX:54053353-54053470 (+)
CBA/J	ENSMUSG00210046874	rRNA gene	ChrX:52764215-52764332 (+)
DBA/2J	ENSMUSG00185035616	rRNA gene	ChrX:65212496-65212613 (+)
FVB/NJ	ENSMUSG00205039217	rRNA gene	ChrX:52323841-52323958 (+)
JF1/MsJ	ENSUMUG00000047554	rRNA gene	ChrX:86025404-86025521 (+)
LP/J	ENSMUSG00230037580	rRNA gene	ChrX:71768364-71768481 (+)
NOD/ShiLtJ	ENSMUSG00190046345	rRNA gene	ChrX:52023584-52023701 (+)
NZO/HlLtJ	ENSMUSG00225049481	rRNA gene	ChrX:76972585-76972702 (+)
PWK/PhJ	ENSLUMG00010046644	rRNA gene	ChrX:51889063-51889180 (+)
SPRET/EiJ	ENSMSPG00010038193	rRNA gene	ChrX:54851602-54851719 (+)
WSB/EiJ	ENSIUOG00005049503	rRNA gene	ChrX:52973885-52974002 (+)

Homology

• Gene Tree
  Gm55174
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076212 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076212	Ensembl Gene Model | MGI Sequence Detail	118	C57BL/6J
transcript	ENSMUST00020182999	Ensembl | MGI Sequence Detail	118	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;