Gm55173 Gene Detail

Summary

• Symbol
  Gm55173
• Name
  predicted gene, 55173

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6846819
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:14002602-14002909 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  131 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846819	unclassified non-coding RNA gene	Chr1:14002602-14002909 (+)
129S1/SvImJ	ENSMUSG00200018636	unclassified non-coding RNA gene	Chr1:11378095-11378402 (+)
A/J	ENSMUSG00195027590	unclassified non-coding RNA gene	Chr1:11150897-11151204 (+)
AKR/J	ENSMUSG00220008390	unclassified non-coding RNA gene	Chr1:11221414-11221721 (+)
BALB/cJ	ENSMUSG00180026996	unclassified non-coding RNA gene	Chr1:11217248-11217555 (+)
C3H/HeJ	ENSMUSG00175000495	unclassified non-coding RNA gene	Chr1:11145925-11146232 (+)
C57BL/6NJ	ENSMUSG00215014565	unclassified non-coding RNA gene	Chr1:11203854-11204161 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005023129	unclassified non-coding RNA gene	Chr1:11571733-11572037 (+)
CBA/J	ENSMUSG00210002957	unclassified non-coding RNA gene	Chr1:11016413-11016720 (+)
DBA/2J	ENSMUSG00185004190	unclassified non-coding RNA gene	Chr1:12084295-12084602 (+)
FVB/NJ	ENSMUSG00205018187	unclassified non-coding RNA gene	Chr1:11299538-11299845 (+)
JF1/MsJ	ENSUMUG00000024459	unclassified non-coding RNA gene	Chr1:11385054-11385362 (+)
LP/J	ENSMUSG00230018928	unclassified non-coding RNA gene	Chr1:12080018-12080325 (+)
NOD/ShiLtJ	ENSMUSG00190033960	unclassified non-coding RNA gene	Chr1:11124319-11124626 (+)
NZO/HlLtJ	ENSMUSG00225005325	unclassified non-coding RNA gene	Chr1:15449183-15449490 (+)
PWK/PhJ	ENSLUMG00010023242	unclassified non-coding RNA gene	Chr1:11008950-11009258 (+)
SPRET/EiJ	ENSMSPG00010027527	unclassified non-coding RNA gene	Chr1:11679239-11679542 (+)
WSB/EiJ	ENSIUOG00005011993	unclassified non-coding RNA gene	Chr1:11145719-11146026 (+)

Homology

• Gene Tree
  Gm55173
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075174 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075174	Ensembl Gene Model | MGI Sequence Detail	308	C57BL/6J
transcript	ENSMUST00020183707	Ensembl | MGI Sequence Detail	308	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;