Gm55172 Gene Detail

Summary

• Symbol
  Gm55172
• Name
  predicted gene, 55172

• Feature Type
  snRNA gene
• IDs
  MGI:6846817
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:163051067-163051172 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  97 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846817	snRNA gene	ChrX:163051067-163051172 (-)
129S1/SvImJ	ENSMUSG00200027407	snRNA gene	ChrX:139773202-139773307 (-)
A/J	ENSMUSG00195016340	snRNA gene	ChrX:144893804-144893909 (-)
AKR/J	ENSMUSG00220032122	snRNA gene	ChrX:136772633-136772738 (-)
BALB/cJ	ENSMUSG00180041723	snRNA gene	ChrX:140283540-140283645 (-)
C3H/HeJ	ENSMUSG00175010418	snRNA gene	ChrX:144829300-144829405 (-)
C57BL/6NJ	ENSMUSG00215024089	snRNA gene	ChrX:140669404-140669509 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005024375	snRNA gene	ChrX:142387484-142387589 (-)
CBA/J	ENSMUSG00210030184	snRNA gene	ChrX:142171535-142171640 (-)
DBA/2J	ENSMUSG00185031480	snRNA gene	ChrX:157100207-157100312 (-)
FVB/NJ	ENSMUSG00205032801	snRNA gene	ChrX:140757404-140757509 (-)
JF1/MsJ	ENSUMUG00000039301	snRNA gene	ChrX:177514254-177514359 (-)
LP/J	ENSMUSG00230026632	snRNA gene	ChrX:163890131-163890236 (-)
NOD/ShiLtJ	ENSMUSG00190034912	snRNA gene	ChrX:141276234-141276339 (-)
NZO/HlLtJ	ENSMUSG00225039092	snRNA gene	ChrX:167278492-167278597 (-)
PWK/PhJ	ENSLUMG00010042818	snRNA gene	ChrX:138589995-138590100 (-)
SPRET/EiJ	ENSMSPG00010026690	snRNA gene	ChrX:143814109-143814215 (-)
WSB/EiJ	ENSIUOG00005025722	snRNA gene	ChrX:141719855-141719960 (-)

Homology

• Gene Tree
  Gm55172
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075879 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075879	Ensembl Gene Model | MGI Sequence Detail	106	C57BL/6J
transcript	ENSMUST00020181677	Ensembl | MGI Sequence Detail	106	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;