Gm55162 Gene Detail

Summary

• Symbol
  Gm55162
• Name
  predicted gene, 55162

• Feature Type
  miRNA gene
• IDs
  MGI:6846797
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:13637096-13637184 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  110 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846797	miRNA gene	Chr16:13637096-13637184 (+)
129S1/SvImJ	ENSMUSG00200046835	miRNA gene	Chr16:10619905-10619993 (+)
A/J	ENSMUSG00195037592	miRNA gene	Chr16:10184881-10184969 (+)
AKR/J	ENSMUSG00220047262	miRNA gene	Chr16:10481772-10481860 (+)
BALB/cJ	ENSMUSG00180041629	miRNA gene	Chr16:10426269-10426357 (+)
C3H/HeJ	ENSMUSG00175051679	miRNA gene	Chr16:10585980-10586068 (+)
C57BL/6NJ	ENSMUSG00215041599	miRNA gene	Chr16:10302045-10302133 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005045976	miRNA gene	Chr16:10479603-10479691 (+)
CBA/J	ENSMUSG00210047025	miRNA gene	Chr16:10602948-10603036 (+)
DBA/2J	ENSMUSG00185035521	miRNA gene	Chr16:10548465-10548553 (+)
FVB/NJ	ENSMUSG00205046432	miRNA gene	Chr16:10541881-10541969 (+)
JF1/MsJ	ENSUMUG00000054654	miRNA gene	Chr16:10656758-10656840 (+)
LP/J	ENSMUSG00230046645	miRNA gene	Chr16:13115440-13115528 (+)
NOD/ShiLtJ	ENSMUSG00190049596	miRNA gene	Chr16:10676774-10676862 (+)
NZO/HlLtJ	ENSMUSG00225032397	miRNA gene	Chr16:16360678-16360766 (+)
PWK/PhJ	ENSLUMG00010048718	miRNA gene	Chr16:10522872-10522960 (+)
SPRET/EiJ	ENSMSPG00010047333	miRNA gene	Chr16:10502434-10502522 (+)
WSB/EiJ	ENSIUOG00005043627	miRNA gene	Chr16:10622485-10622573 (+)

Homology

• Gene Tree
  Gm55162
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075895 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075895	Ensembl Gene Model | MGI Sequence Detail	89	C57BL/6J
transcript	ENSMUST00020181683	Ensembl | MGI Sequence Detail	89	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;