Gm55147 Gene Detail

Summary

• Symbol
  Gm55147
• Name
  predicted gene, 55147

• Feature Type
  miRNA gene
• IDs
  MGI:6846767
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:3749178-3749240 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  93 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846767	miRNA gene	Chr12:3749178-3749240 (+)
129S1/SvImJ	ENSMUSG00200024360	miRNA gene	Chr12:700104-700166 (+)
A/J	ENSMUSG00195016272	miRNA gene	Chr12:730141-730203 (+)
AKR/J	ENSMUSG00220030940	miRNA gene	Chr12:725369-725431 (+)
BALB/cJ	ENSMUSG00180015694	miRNA gene	Chr12:726580-726642 (+)
C3H/HeJ	ENSMUSG00175009623	miRNA gene	Chr12:702857-702919 (+)
C57BL/6NJ	ENSMUSG00215019325	miRNA gene	Chr12:657322-657384 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005022967	miRNA gene	Chr12:527540-527602 (+)
CBA/J	ENSMUSG00210013784	miRNA gene	Chr12:722633-722695 (+)
DBA/2J	ENSMUSG00185021798	miRNA gene	Chr12:709501-709563 (+)
FVB/NJ	ENSMUSG00205003771	miRNA gene	Chr12:507158-507220 (+)
JF1/MsJ	ENSUMUG00000036602	miRNA gene	Chr12:692160-692222 (+)
LP/J	ENSMUSG00230011774	miRNA gene	Chr12:2537648-2537710 (+)
NOD/ShiLtJ	ENSMUSG00190008078	miRNA gene	Chr12:1949314-1949376 (+)
NZO/HlLtJ	ENSMUSG00225019759	miRNA gene	Chr12:4588400-4588462 (+)
PWK/PhJ	ENSLUMG00010017294	miRNA gene	Chr12:518976-519038 (+)
SPRET/EiJ	ENSMSPG00010005167	miRNA gene	Chr12:919013-919075 (+)
WSB/EiJ	ENSIUOG00005002461	miRNA gene	Chr12:708266-708328 (+)

Homology

• Gene Tree
  Gm55147
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076574 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076574	Ensembl Gene Model | MGI Sequence Detail	63	C57BL/6J
transcript	ENSMUST00020181713	Ensembl | MGI Sequence Detail	63	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;