Gm55142 Gene Detail

Summary

• Symbol
  Gm55142
• Name
  predicted gene, 55142

• Feature Type
  snRNA gene
• IDs
  MGI:6846757
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:7950231-7950332 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  72 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846757	snRNA gene	ChrX:7950231-7950332 (+)
129S1/SvImJ	ENSMUSG00200034634	snRNA gene	ChrX:2650713-2650814 (+)
A/J	ENSMUSG00195041938	snRNA gene	ChrX:2673883-2673984 (+)
AKR/J	ENSMUSG00220036763	snRNA gene	ChrX:2661316-2661417 (+)
BALB/cJ	ENSMUSG00180031143	snRNA gene	ChrX:2671596-2671697 (+)
C3H/HeJ	ENSMUSG00175034106	snRNA gene	ChrX:2685532-2685633 (+)
C57BL/6NJ	ENSMUSG00215040941	snRNA gene	ChrX:3349408-3349509 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005034720	snRNA gene	ChrX:2619955-2620056 (+)
CBA/J	ENSMUSG00210039426	snRNA gene	ChrX:2702427-2702528 (+)
DBA/2J	ENSMUSG00185029208	snRNA gene	ChrX:9319552-9319653 (+)
FVB/NJ	ENSMUSG00205035700	snRNA gene	ChrX:2696193-2696294 (+)
JF1/MsJ	ENSUMUG00000042572	snRNA gene	ChrX:23206929-23207030 (+)
LP/J	ENSMUSG00230033762	snRNA gene	ChrX:13839546-13839647 (+)
NOD/ShiLtJ	ENSMUSG00190044837	snRNA gene	ChrX:2676170-2676271 (+)
NZO/HlLtJ	ENSMUSG00225046257	snRNA gene	ChrX:19105275-19105376 (+)
PWK/PhJ	ENSLUMG00010035472	snRNA gene	ChrX:2668680-2668781 (+)
SPRET/EiJ	ENSMSPG00010027025	snRNA gene	ChrX:2705514-2705615 (+)
WSB/EiJ	ENSIUOG00005032751	snRNA gene	ChrX:15851629-15851730 (-)

Homology

• Gene Tree
  Gm55142
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076242 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076242	Ensembl Gene Model | MGI Sequence Detail	102	C57BL/6J
transcript	ENSMUST00020183019	Ensembl | MGI Sequence Detail	102	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;