Gm55139 Gene Detail

Summary

• Symbol
  Gm55139
• Name
  predicted gene, 55139

• Feature Type
  snRNA gene
• IDs
  MGI:6846751
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:131624020-131624114 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  165 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846751	snRNA gene	Chr3:131624020-131624114 (+)
129S1/SvImJ	ENSMUSG00200004193	snRNA gene	Chr3:128399139-128399233 (+)
A/J	ENSMUSG00195009046	snRNA gene	Chr3:128519556-128519649 (+)
AKR/J	ENSMUSG00220022713	snRNA gene	Chr3:126958836-126958929 (+)
BALB/cJ	ENSMUSG00180003726	snRNA gene	Chr3:128448468-128448561 (+)
C3H/HeJ	ENSMUSG00175014744	snRNA gene	Chr3:128014444-128014537 (+)
C57BL/6NJ	ENSMUSG00215023580	snRNA gene	Chr3:128775010-128775104 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005003873	snRNA gene	Chr3:129081421-129081515 (+)
CBA/J	ENSMUSG00210004316	snRNA gene	Chr3:128640049-128640142 (+)
DBA/2J	ENSMUSG00185027194	snRNA gene	Chr3:129234787-129234880 (+)
FVB/NJ	ENSMUSG00205027436	snRNA gene	Chr3:127574452-127574545 (+)
JF1/MsJ	ENSUMUG00000033624	snRNA gene	Chr3:127977299-127977393 (+)
LP/J	ENSMUSG00230004498	snRNA gene	Chr3:131217716-131217810 (+)
NOD/ShiLtJ	ENSMUSG00190001710	snRNA gene	Chr3:129636691-129636784 (+)
NZO/HlLtJ	ENSMUSG00225005919	snRNA gene	Chr3:133672769-133672862 (+)
PWK/PhJ	ENSLUMG00010015781	snRNA gene	Chr3:127979814-127979908 (+)
SPRET/EiJ	ENSMSPG00010013314	snRNA gene	Chr3:128957526-128957620 (+)
WSB/EiJ	ENSIUOG00005017565	snRNA gene	Chr3:128783077-128783171 (+)

Homology

• Gene Tree
  Gm55139
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075251 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075251	Ensembl Gene Model | MGI Sequence Detail	95	C57BL/6J
transcript	ENSMUST00020182522	Ensembl | MGI Sequence Detail	95	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;