Gm55138 Gene Detail

Summary

• Symbol
  Gm55138
• Name
  predicted gene, 55138

• Feature Type
  snoRNA gene
• IDs
  MGI:6846749
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:93752031-93752198 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  132 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846749	snoRNA gene	Chr10:93752031-93752198 (-)
129S1/SvImJ	ENSMUSG00200030027	snoRNA gene	Chr10:90245855-90246022 (-)
A/J	ENSMUSG00195022142	snoRNA gene	Chr10:90683805-90683972 (-)
AKR/J	ENSMUSG00220022735	snoRNA gene	Chr10:90251299-90251466 (-)
BALB/cJ	ENSMUSG00180033551	snoRNA gene	Chr10:90686485-90686652 (-)
C3H/HeJ	ENSMUSG00175023777	snoRNA gene	Chr10:90587299-90587466 (-)
C57BL/6NJ	ENSMUSG00215029188	snoRNA gene	Chr10:90282412-90282579 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005036788	snoRNA gene	Chr10:89976854-89977033 (-)
CBA/J	ENSMUSG00210036280	snoRNA gene	Chr10:90422395-90422562 (-)
DBA/2J	ENSMUSG00185043545	snoRNA gene	Chr10:90634370-90634537 (-)
FVB/NJ	ENSMUSG00205020087	snoRNA gene	Chr10:90332639-90332806 (-)
JF1/MsJ	ENSUMUG00000027642	snoRNA gene	Chr10:92053000-92053167 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190019763	snoRNA gene	Chr10:90671677-90671844 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010024665	snoRNA gene	Chr10:90322618-90322785 (-)
SPRET/EiJ	ENSMSPG00010010695	snoRNA gene	Chr10:91939555-91939722 (-)
WSB/EiJ	ENSIUOG00005040069	snoRNA gene	Chr10:90366873-90367040 (-)

Homology

• Gene Tree
  Gm55138
  

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00002075638 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075638	Ensembl Gene Model | MGI Sequence Detail	168	C57BL/6J
transcript	ENSMUST00020183240	Ensembl | MGI Sequence Detail	168	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;