Gm55135 Gene Detail

Summary

• Symbol
  Gm55135
• Name
  predicted gene, 55135

• Feature Type
  rRNA gene
• IDs
  MGI:6846743
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:118566018-118566134 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  103 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846743	rRNA gene	Chr1:118566018-118566134 (-)
129S1/SvImJ	ENSMUSG00200001798	rRNA gene	Chr1:116037754-116037870 (-)
A/J	ENSMUSG00195004670	rRNA gene	Chr1:115280093-115280209 (-)
AKR/J	ENSMUSG00220025168	rRNA gene	Chr1:115095529-115095645 (-)
BALB/cJ	ENSMUSG00180012801	rRNA gene	Chr1:115687449-115687565 (-)
C3H/HeJ	ENSMUSG00175019570	rRNA gene	Chr1:115511108-115511224 (-)
C57BL/6NJ	ENSMUSG00215013361	rRNA gene	Chr1:115472580-115472696 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006517	rRNA gene	Chr1:114415574-114415690 (-)
CBA/J	ENSMUSG00210001332	rRNA gene	Chr1:115340755-115340871 (-)
DBA/2J	ENSMUSG00185013665	rRNA gene	Chr1:119788911-119789027 (-)
FVB/NJ	ENSMUSG00205012371	rRNA gene	Chr1:114840704-114840820 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230009089	rRNA gene	Chr1:119215680-119215796 (-)
NOD/ShiLtJ	ENSMUSG00190006587	rRNA gene	Chr1:115325934-115326050 (-)
NZO/HlLtJ	ENSMUSG00225005406	rRNA gene	Chr1:123007672-123007788 (-)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010016776	rRNA gene	Chr1:117101010-117101126 (-)
WSB/EiJ	ENSIUOG00005003016	rRNA gene	Chr1:115179904-115180020 (-)

Homology

• Gene Tree
  Gm55135
  

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00002076551 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076551	Ensembl Gene Model | MGI Sequence Detail	117	C57BL/6J
transcript	ENSMUST00020181852	Ensembl | MGI Sequence Detail	117	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;