Gm55130 Gene Detail

Summary

• Symbol
  Gm55130
• Name
  predicted gene, 55130

• Feature Type
  rRNA gene
• IDs
  MGI:6846733
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:59703963-59704099 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  112 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846733	rRNA gene	Chr11:59703963-59704099 (+)
129S1/SvImJ	ENSMUSG00200037466	rRNA gene	Chr11:56711524-56711660 (+)
A/J	ENSMUSG00195044039	rRNA gene	Chr11:56647727-56647863 (+)
AKR/J	ENSMUSG00220050431	rRNA gene	Chr11:56816980-56817116 (+)
BALB/cJ	ENSMUSG00180050000	rRNA gene	Chr11:56727614-56727750 (+)
C3H/HeJ	ENSMUSG00175050297	rRNA gene	Chr11:56682851-56682987 (+)
C57BL/6NJ	ENSMUSG00215040984	rRNA gene	Chr11:56494932-56495068 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005047456	rRNA gene	Chr11:56222027-56222163 (+)
CBA/J	ENSMUSG00210040564	rRNA gene	Chr11:56534213-56534349 (+)
DBA/2J	ENSMUSG00185044211	rRNA gene	Chr11:56711210-56711346 (+)
FVB/NJ	ENSMUSG00205051702	rRNA gene	Chr11:56601332-56601468 (+)
JF1/MsJ	ENSUMUG00000049002	rRNA gene	Chr11:57066176-57066312 (+)
LP/J	ENSMUSG00230050439	rRNA gene	Chr11:57919514-57919650 (+)
NOD/ShiLtJ	ENSMUSG00190051377	rRNA gene	Chr11:56780747-56780883 (+)
NZO/HlLtJ	ENSMUSG00225033249	rRNA gene	Chr11:59931743-59931879 (+)
PWK/PhJ	ENSLUMG00010035542	rRNA gene	Chr11:56527208-56527344 (+)
SPRET/EiJ	ENSMSPG00010041886	rRNA gene	Chr11:57305306-57305436 (+)
WSB/EiJ	ENSIUOG00005041023	rRNA gene	Chr11:56585455-56585591 (+)

Homology

• Gene Tree
  Gm55130
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075476 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075476	Ensembl Gene Model | MGI Sequence Detail	137	C57BL/6J
transcript	ENSMUST00020181943	Ensembl | MGI Sequence Detail	137	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;