Gm55129 Gene Detail

Summary

• Symbol
  Gm55129
• Name
  predicted gene, 55129

• Feature Type
  rRNA gene
• IDs
  MGI:6846731
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:83194392-83194512 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  82 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846731	rRNA gene	Chr1:83194392-83194512 (-)
129S1/SvImJ	ENSMUSG00200035677	rRNA gene	Chr1:80868740-80868860 (-)
A/J	ENSMUSG00195011122	rRNA gene	Chr1:80271238-80271358 (-)
AKR/J	ENSMUSG00220010856	rRNA gene	Chr1:80454806-80454926 (-)
BALB/cJ	ENSMUSG00180020890	rRNA gene	Chr1:80542955-80543075 (-)
C3H/HeJ	ENSMUSG00175018346	rRNA gene	Chr1:80677366-80677486 (-)
C57BL/6NJ	ENSMUSG00215028644	rRNA gene	Chr1:80591087-80591207 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005029786	rRNA gene	Chr1:80281757-80281877 (-)
CBA/J	ENSMUSG00210043227	rRNA gene	Chr1:80452267-80452387 (-)
DBA/2J	ENSMUSG00185017096	rRNA gene	Chr1:81499726-81499846 (-)
FVB/NJ	ENSMUSG00205041727	rRNA gene	Chr1:80014540-80014660 (-)
JF1/MsJ	ENSUMUG00000006830	rRNA gene	Chr1:80317054-80317174 (-)
LP/J	ENSMUSG00230021390	rRNA gene	Chr1:81435876-81435996 (-)
NOD/ShiLtJ	ENSMUSG00190041601	rRNA gene	Chr1:80655828-80655948 (-)
NZO/HlLtJ	ENSMUSG00225004436	rRNA gene	Chr1:84681221-84681341 (-)
PWK/PhJ	ENSLUMG00010014265	rRNA gene	Chr1:79940089-79940209 (-)
SPRET/EiJ	ENSMSPG00010047999	rRNA gene	Chr1:82066157-82066277 (-)
WSB/EiJ	ENSIUOG00005014388	rRNA gene	Chr1:80235755-80235875 (-)

Homology

• Gene Tree
  Gm55129
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075005 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075005	Ensembl Gene Model | MGI Sequence Detail	121	C57BL/6J
transcript	ENSMUST00020183612	Ensembl | MGI Sequence Detail	121	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;